Gene : Cagra.4395s0134 C. grandiflora v1.1
Defline:  (1 of 5) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  134
Name:  ? Cagra.4395s0134 Secondary Identifier:  ? PAC:28898431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-361 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0134 0.5kb upstream 0.5kb upstream 3113 true Scaffold4395: 517636-520748 Capsella grandiflora
Cagra.4395s0134 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 517636-518135 Capsella grandiflora
Cagra.4395s0134 0.5kb downstream 0.5kb downstream 3113 true Scaffold4395: 518136-521248 Capsella grandiflora
Cagra.4395s0134 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 520749-521248 Capsella grandiflora
Cagra.4395s0134 1.0kb upstream 1.0kb upstream 3613 true Scaffold4395: 517136-520748 Capsella grandiflora
Cagra.4395s0134 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 517136-518135 Capsella grandiflora
Cagra.4395s0134 1.0kb downstream 1.0kb downstream 3613 true Scaffold4395: 518136-521748 Capsella grandiflora
Cagra.4395s0134 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 520749-521748 Capsella grandiflora
Cagra.4395s0134 2.0kb upstream 2.0kb upstream 4613 true Scaffold4395: 516136-520748 Capsella grandiflora
Cagra.4395s0134 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 516136-518135 Capsella grandiflora
Cagra.4395s0134 2.0kb downstream 2.0kb downstream 4613 true Scaffold4395: 518136-522748 Capsella grandiflora
Cagra.4395s0134 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 520749-522748 Capsella grandiflora
Cagra.4395s0134 5.0kb upstream 5.0kb upstream 7613 true Scaffold4395: 513136-520748 Capsella grandiflora
Cagra.4395s0134 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 513136-518135 Capsella grandiflora
Cagra.4395s0134 5.0kb downstream 5.0kb downstream 7613 true Scaffold4395: 518136-525748 Capsella grandiflora
Cagra.4395s0134 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 520749-525748 Capsella grandiflora
Cagra.4395s0134 10.0kb upstream 10.0kb upstream 12613 true Scaffold4395: 508136-520748 Capsella grandiflora
Cagra.4395s0134 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 508136-518135 Capsella grandiflora
Cagra.4395s0134 10.0kb downstream 10.0kb downstream 12613 true Scaffold4395: 518136-530748 Capsella grandiflora
Cagra.4395s0134 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 520749-530748 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510262 5273 Angiosperm View MSA
122361344 5261 Brassicaceae View MSA
123798141 5264 Brassicales-Malvales View MSA
124295816 5266 SBM View MSA
124148149 5268 Malvidae View MSA
123874205 5270 Rosid View MSA
123458212 5271 Pentapetalae View MSA
122493621 5272 Eudicot View MSA
120783368 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain