Gene : Cagra.4395s0147 C. grandiflora v1.1
Defline:  (1 of 3) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  147
Name:  ? Cagra.4395s0147 Secondary Identifier:  ? PAC:28898258
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRNA-CHARGING-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0147 0.5kb upstream 0.5kb upstream 4508 true Scaffold4395: 571391-575898 Capsella grandiflora
Cagra.4395s0147 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 575399-575898 Capsella grandiflora
Cagra.4395s0147 0.5kb downstream 0.5kb downstream 4508 true Scaffold4395: 570891-575398 Capsella grandiflora
Cagra.4395s0147 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 570891-571390 Capsella grandiflora
Cagra.4395s0147 1.0kb upstream 1.0kb upstream 5008 true Scaffold4395: 571391-576398 Capsella grandiflora
Cagra.4395s0147 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 575399-576398 Capsella grandiflora
Cagra.4395s0147 1.0kb downstream 1.0kb downstream 5008 true Scaffold4395: 570391-575398 Capsella grandiflora
Cagra.4395s0147 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 570391-571390 Capsella grandiflora
Cagra.4395s0147 2.0kb upstream 2.0kb upstream 6008 true Scaffold4395: 571391-577398 Capsella grandiflora
Cagra.4395s0147 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 575399-577398 Capsella grandiflora
Cagra.4395s0147 2.0kb downstream 2.0kb downstream 6008 true Scaffold4395: 569391-575398 Capsella grandiflora
Cagra.4395s0147 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 569391-571390 Capsella grandiflora
Cagra.4395s0147 5.0kb upstream 5.0kb upstream 9008 true Scaffold4395: 571391-580398 Capsella grandiflora
Cagra.4395s0147 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 575399-580398 Capsella grandiflora
Cagra.4395s0147 5.0kb downstream 5.0kb downstream 9008 true Scaffold4395: 566391-575398 Capsella grandiflora
Cagra.4395s0147 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 566391-571390 Capsella grandiflora
Cagra.4395s0147 10.0kb upstream 10.0kb upstream 14008 true Scaffold4395: 571391-585398 Capsella grandiflora
Cagra.4395s0147 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 575399-585398 Capsella grandiflora
Cagra.4395s0147 10.0kb downstream 10.0kb downstream 14008 true Scaffold4395: 561391-575398 Capsella grandiflora
Cagra.4395s0147 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 561391-571390 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368592 5261 Brassicaceae View MSA
123840643 5264 Brassicales-Malvales View MSA
124345424 5266 SBM View MSA
124237184 5268 Malvidae View MSA
124066090 5270 Rosid View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain