Gene : Cagra.4395s0144 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Genomic Order:  144
Name:  ? Cagra.4395s0144 Secondary Identifier:  ? PAC:28898444
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0144 0.5kb upstream 0.5kb upstream 2052 true Scaffold4395: 562600-564651 Capsella grandiflora
Cagra.4395s0144 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 562600-563099 Capsella grandiflora
Cagra.4395s0144 0.5kb downstream 0.5kb downstream 2052 true Scaffold4395: 563100-565151 Capsella grandiflora
Cagra.4395s0144 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 564652-565151 Capsella grandiflora
Cagra.4395s0144 1.0kb upstream 1.0kb upstream 2552 true Scaffold4395: 562100-564651 Capsella grandiflora
Cagra.4395s0144 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 562100-563099 Capsella grandiflora
Cagra.4395s0144 1.0kb downstream 1.0kb downstream 2552 true Scaffold4395: 563100-565651 Capsella grandiflora
Cagra.4395s0144 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 564652-565651 Capsella grandiflora
Cagra.4395s0144 2.0kb upstream 2.0kb upstream 3552 true Scaffold4395: 561100-564651 Capsella grandiflora
Cagra.4395s0144 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 561100-563099 Capsella grandiflora
Cagra.4395s0144 2.0kb downstream 2.0kb downstream 3552 true Scaffold4395: 563100-566651 Capsella grandiflora
Cagra.4395s0144 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 564652-566651 Capsella grandiflora
Cagra.4395s0144 5.0kb upstream 5.0kb upstream 6552 true Scaffold4395: 558100-564651 Capsella grandiflora
Cagra.4395s0144 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 558100-563099 Capsella grandiflora
Cagra.4395s0144 5.0kb downstream 5.0kb downstream 6552 true Scaffold4395: 563100-569651 Capsella grandiflora
Cagra.4395s0144 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 564652-569651 Capsella grandiflora
Cagra.4395s0144 10.0kb upstream 10.0kb upstream 11552 true Scaffold4395: 553100-564651 Capsella grandiflora
Cagra.4395s0144 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 553100-563099 Capsella grandiflora
Cagra.4395s0144 10.0kb downstream 10.0kb downstream 11552 true Scaffold4395: 563100-574651 Capsella grandiflora
Cagra.4395s0144 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 564652-574651 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369573 5261 Brassicaceae View MSA
123829866 5264 Brassicales-Malvales View MSA
124349960 5266 SBM View MSA
124245233 5268 Malvidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain