Gene : Cagra.4395s0171 C. grandiflora v1.1
Defline:  (1 of 1) 6.3.4.13 - Phosphoribosylamine--glycine ligase / Phosphoribosylglycinamide synthetase Genomic Order:  171
Name:  ? Cagra.4395s0171 Secondary Identifier:  ? PAC:28898344
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6121 Capsella grandiflora pathologic  
Cgrandiflora PWY-841 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0171 0.5kb upstream 0.5kb upstream 3037 true Scaffold4395: 644323-647359 Capsella grandiflora
Cagra.4395s0171 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 646860-647359 Capsella grandiflora
Cagra.4395s0171 0.5kb downstream 0.5kb downstream 3037 true Scaffold4395: 643823-646859 Capsella grandiflora
Cagra.4395s0171 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 643823-644322 Capsella grandiflora
Cagra.4395s0171 1.0kb upstream 1.0kb upstream 3537 true Scaffold4395: 644323-647859 Capsella grandiflora
Cagra.4395s0171 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 646860-647859 Capsella grandiflora
Cagra.4395s0171 1.0kb downstream 1.0kb downstream 3537 true Scaffold4395: 643323-646859 Capsella grandiflora
Cagra.4395s0171 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 643323-644322 Capsella grandiflora
Cagra.4395s0171 2.0kb upstream 2.0kb upstream 4537 true Scaffold4395: 644323-648859 Capsella grandiflora
Cagra.4395s0171 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 646860-648859 Capsella grandiflora
Cagra.4395s0171 2.0kb downstream 2.0kb downstream 4537 true Scaffold4395: 642323-646859 Capsella grandiflora
Cagra.4395s0171 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 642323-644322 Capsella grandiflora
Cagra.4395s0171 5.0kb upstream 5.0kb upstream 7537 true Scaffold4395: 644323-651859 Capsella grandiflora
Cagra.4395s0171 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 646860-651859 Capsella grandiflora
Cagra.4395s0171 5.0kb downstream 5.0kb downstream 7537 true Scaffold4395: 639323-646859 Capsella grandiflora
Cagra.4395s0171 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 639323-644322 Capsella grandiflora
Cagra.4395s0171 10.0kb upstream 10.0kb upstream 12537 true Scaffold4395: 644323-656859 Capsella grandiflora
Cagra.4395s0171 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 646860-656859 Capsella grandiflora
Cagra.4395s0171 10.0kb downstream 10.0kb downstream 12537 true Scaffold4395: 634323-646859 Capsella grandiflora
Cagra.4395s0171 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 634323-644322 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368380 5261 Brassicaceae View MSA
123831561 5264 Brassicales-Malvales View MSA
124337590 5266 SBM View MSA
124240737 5268 Malvidae View MSA
124061886 5270 Rosid View MSA
123741670 5271 Pentapetalae View MSA
122788361 5272 Eudicot View MSA
122046368 5273 Angiosperm View MSA
121345557 5274 Embryophyte View MSA
123424132 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain