Gene : Cagra.4395s0165 C. grandiflora v1.1
Defline:  (1 of 2) 2.4.2.17 - ATP phosphoribosyltransferase / Phosphoribosyl-ATP pyrophosphorylase Genomic Order:  165
Name:  ? Cagra.4395s0165 Secondary Identifier:  ? PAC:28898415
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora HISTSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0165 0.5kb upstream 0.5kb upstream 3961 true Scaffold4395: 625617-629577 Capsella grandiflora
Cagra.4395s0165 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 625617-626116 Capsella grandiflora
Cagra.4395s0165 0.5kb downstream 0.5kb downstream 3961 true Scaffold4395: 626117-630077 Capsella grandiflora
Cagra.4395s0165 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 629578-630077 Capsella grandiflora
Cagra.4395s0165 1.0kb upstream 1.0kb upstream 4461 true Scaffold4395: 625117-629577 Capsella grandiflora
Cagra.4395s0165 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 625117-626116 Capsella grandiflora
Cagra.4395s0165 1.0kb downstream 1.0kb downstream 4461 true Scaffold4395: 626117-630577 Capsella grandiflora
Cagra.4395s0165 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 629578-630577 Capsella grandiflora
Cagra.4395s0165 2.0kb upstream 2.0kb upstream 5461 true Scaffold4395: 624117-629577 Capsella grandiflora
Cagra.4395s0165 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 624117-626116 Capsella grandiflora
Cagra.4395s0165 2.0kb downstream 2.0kb downstream 5461 true Scaffold4395: 626117-631577 Capsella grandiflora
Cagra.4395s0165 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 629578-631577 Capsella grandiflora
Cagra.4395s0165 5.0kb upstream 5.0kb upstream 8461 true Scaffold4395: 621117-629577 Capsella grandiflora
Cagra.4395s0165 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 621117-626116 Capsella grandiflora
Cagra.4395s0165 5.0kb downstream 5.0kb downstream 8461 true Scaffold4395: 626117-634577 Capsella grandiflora
Cagra.4395s0165 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 629578-634577 Capsella grandiflora
Cagra.4395s0165 10.0kb upstream 10.0kb upstream 13461 true Scaffold4395: 616117-629577 Capsella grandiflora
Cagra.4395s0165 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 616117-626116 Capsella grandiflora
Cagra.4395s0165 10.0kb downstream 10.0kb downstream 13461 true Scaffold4395: 626117-639577 Capsella grandiflora
Cagra.4395s0165 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 629578-639577 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367089 5261 Brassicaceae View MSA
123840456 5264 Brassicales-Malvales View MSA
124322722 5266 SBM View MSA
124239271 5268 Malvidae View MSA
124065135 5270 Rosid View MSA
123747829 5271 Pentapetalae View MSA
122790103 5272 Eudicot View MSA
122042069 5273 Angiosperm View MSA
121345675 5274 Embryophyte View MSA
123427111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain