Gene : Cagra.4395s0190 C. grandiflora v1.1
Defline:  (1 of 5) PTHR22950:SF278 - AMINO ACID PERMEASE 1-RELATED Genomic Order:  190
Name:  ? Cagra.4395s0190 Secondary Identifier:  ? PAC:28898468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0190 0.5kb upstream 0.5kb upstream 3995 true Scaffold4395: 724702-728696 Capsella grandiflora
Cagra.4395s0190 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 724702-725201 Capsella grandiflora
Cagra.4395s0190 0.5kb downstream 0.5kb downstream 3995 true Scaffold4395: 725202-729196 Capsella grandiflora
Cagra.4395s0190 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 728697-729196 Capsella grandiflora
Cagra.4395s0190 1.0kb upstream 1.0kb upstream 4495 true Scaffold4395: 724202-728696 Capsella grandiflora
Cagra.4395s0190 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 724202-725201 Capsella grandiflora
Cagra.4395s0190 1.0kb downstream 1.0kb downstream 4495 true Scaffold4395: 725202-729696 Capsella grandiflora
Cagra.4395s0190 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 728697-729696 Capsella grandiflora
Cagra.4395s0190 2.0kb upstream 2.0kb upstream 5495 true Scaffold4395: 723202-728696 Capsella grandiflora
Cagra.4395s0190 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 723202-725201 Capsella grandiflora
Cagra.4395s0190 2.0kb downstream 2.0kb downstream 5495 true Scaffold4395: 725202-730696 Capsella grandiflora
Cagra.4395s0190 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 728697-730696 Capsella grandiflora
Cagra.4395s0190 5.0kb upstream 5.0kb upstream 8495 true Scaffold4395: 720202-728696 Capsella grandiflora
Cagra.4395s0190 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 720202-725201 Capsella grandiflora
Cagra.4395s0190 5.0kb downstream 5.0kb downstream 8495 true Scaffold4395: 725202-733696 Capsella grandiflora
Cagra.4395s0190 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 728697-733696 Capsella grandiflora
Cagra.4395s0190 10.0kb upstream 10.0kb upstream 13495 true Scaffold4395: 715202-728696 Capsella grandiflora
Cagra.4395s0190 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 715202-725201 Capsella grandiflora
Cagra.4395s0190 10.0kb downstream 10.0kb downstream 13495 true Scaffold4395: 725202-738696 Capsella grandiflora
Cagra.4395s0190 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 728697-738696 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365323 5261 Brassicaceae View MSA
123838794 5264 Brassicales-Malvales View MSA
124336931 5266 SBM View MSA
124238078 5268 Malvidae View MSA
124060792 5270 Rosid View MSA
123749377 5271 Pentapetalae View MSA
122789981 5272 Eudicot View MSA
122044939 5273 Angiosperm View MSA
121310365 5274 Embryophyte View MSA
123347867 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain