Gene : Cagra.4395s0081 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10252:SF48 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED Genomic Order:  81
Name:  ? Cagra.4395s0081 Secondary Identifier:  ? PAC:28898255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0081 0.5kb upstream 0.5kb upstream 2147 true Scaffold4395: 335538-337684 Capsella grandiflora
Cagra.4395s0081 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 335538-336037 Capsella grandiflora
Cagra.4395s0081 0.5kb downstream 0.5kb downstream 2147 true Scaffold4395: 336038-338184 Capsella grandiflora
Cagra.4395s0081 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 337685-338184 Capsella grandiflora
Cagra.4395s0081 1.0kb upstream 1.0kb upstream 2647 true Scaffold4395: 335038-337684 Capsella grandiflora
Cagra.4395s0081 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 335038-336037 Capsella grandiflora
Cagra.4395s0081 1.0kb downstream 1.0kb downstream 2647 true Scaffold4395: 336038-338684 Capsella grandiflora
Cagra.4395s0081 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 337685-338684 Capsella grandiflora
Cagra.4395s0081 2.0kb upstream 2.0kb upstream 3647 true Scaffold4395: 334038-337684 Capsella grandiflora
Cagra.4395s0081 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 334038-336037 Capsella grandiflora
Cagra.4395s0081 2.0kb downstream 2.0kb downstream 3647 true Scaffold4395: 336038-339684 Capsella grandiflora
Cagra.4395s0081 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 337685-339684 Capsella grandiflora
Cagra.4395s0081 5.0kb upstream 5.0kb upstream 6647 true Scaffold4395: 331038-337684 Capsella grandiflora
Cagra.4395s0081 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 331038-336037 Capsella grandiflora
Cagra.4395s0081 5.0kb downstream 5.0kb downstream 6647 true Scaffold4395: 336038-342684 Capsella grandiflora
Cagra.4395s0081 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 337685-342684 Capsella grandiflora
Cagra.4395s0081 10.0kb upstream 10.0kb upstream 11647 true Scaffold4395: 326038-337684 Capsella grandiflora
Cagra.4395s0081 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 326038-336037 Capsella grandiflora
Cagra.4395s0081 10.0kb downstream 10.0kb downstream 11647 true Scaffold4395: 336038-347684 Capsella grandiflora
Cagra.4395s0081 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 337685-347684 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366542 5261 Brassicaceae View MSA
123838464 5264 Brassicales-Malvales View MSA
124342477 5266 SBM View MSA
124251136 5268 Malvidae View MSA
124071144 5270 Rosid View MSA
123743416 5271 Pentapetalae View MSA
122794744 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain