Gene : Cagra.4395s0111 C. grandiflora v1.1
Defline:  (1 of 1) KOG0185 - 20S proteasome, regulatory subunit beta type PSMB4/PRE4 Genomic Order:  111
Name:  ? Cagra.4395s0111 Secondary Identifier:  ? PAC:28898395
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0111 0.5kb upstream 0.5kb upstream 2460 true Scaffold4395: 443856-446315 Capsella grandiflora
Cagra.4395s0111 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 443856-444355 Capsella grandiflora
Cagra.4395s0111 0.5kb downstream 0.5kb downstream 2460 true Scaffold4395: 444356-446815 Capsella grandiflora
Cagra.4395s0111 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 446316-446815 Capsella grandiflora
Cagra.4395s0111 1.0kb upstream 1.0kb upstream 2960 true Scaffold4395: 443356-446315 Capsella grandiflora
Cagra.4395s0111 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 443356-444355 Capsella grandiflora
Cagra.4395s0111 1.0kb downstream 1.0kb downstream 2960 true Scaffold4395: 444356-447315 Capsella grandiflora
Cagra.4395s0111 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 446316-447315 Capsella grandiflora
Cagra.4395s0111 2.0kb upstream 2.0kb upstream 3960 true Scaffold4395: 442356-446315 Capsella grandiflora
Cagra.4395s0111 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 442356-444355 Capsella grandiflora
Cagra.4395s0111 2.0kb downstream 2.0kb downstream 3960 true Scaffold4395: 444356-448315 Capsella grandiflora
Cagra.4395s0111 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 446316-448315 Capsella grandiflora
Cagra.4395s0111 5.0kb upstream 5.0kb upstream 6960 true Scaffold4395: 439356-446315 Capsella grandiflora
Cagra.4395s0111 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 439356-444355 Capsella grandiflora
Cagra.4395s0111 5.0kb downstream 5.0kb downstream 6960 true Scaffold4395: 444356-451315 Capsella grandiflora
Cagra.4395s0111 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 446316-451315 Capsella grandiflora
Cagra.4395s0111 10.0kb upstream 10.0kb upstream 11960 true Scaffold4395: 434356-446315 Capsella grandiflora
Cagra.4395s0111 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 434356-444355 Capsella grandiflora
Cagra.4395s0111 10.0kb downstream 10.0kb downstream 11960 true Scaffold4395: 444356-456315 Capsella grandiflora
Cagra.4395s0111 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 446316-456315 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377102 5261 Brassicaceae View MSA
123838230 5264 Brassicales-Malvales View MSA
124339371 5266 SBM View MSA
124240458 5268 Malvidae View MSA
124062150 5270 Rosid View MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain