Gene : Cagra.4395s0116 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10804:SF17 - XAA-PRO AMINOPEPTIDASE 3-RELATED Genomic Order:  116
Name:  ? Cagra.4395s0116 Secondary Identifier:  ? PAC:28898447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0116 0.5kb upstream 0.5kb upstream 5501 true Scaffold4395: 461417-466917 Capsella grandiflora
Cagra.4395s0116 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 461417-461916 Capsella grandiflora
Cagra.4395s0116 0.5kb downstream 0.5kb downstream 5501 true Scaffold4395: 461917-467417 Capsella grandiflora
Cagra.4395s0116 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 466918-467417 Capsella grandiflora
Cagra.4395s0116 1.0kb upstream 1.0kb upstream 6001 true Scaffold4395: 460917-466917 Capsella grandiflora
Cagra.4395s0116 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 460917-461916 Capsella grandiflora
Cagra.4395s0116 1.0kb downstream 1.0kb downstream 6001 true Scaffold4395: 461917-467917 Capsella grandiflora
Cagra.4395s0116 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 466918-467917 Capsella grandiflora
Cagra.4395s0116 2.0kb upstream 2.0kb upstream 7001 true Scaffold4395: 459917-466917 Capsella grandiflora
Cagra.4395s0116 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 459917-461916 Capsella grandiflora
Cagra.4395s0116 2.0kb downstream 2.0kb downstream 7001 true Scaffold4395: 461917-468917 Capsella grandiflora
Cagra.4395s0116 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 466918-468917 Capsella grandiflora
Cagra.4395s0116 5.0kb upstream 5.0kb upstream 10001 true Scaffold4395: 456917-466917 Capsella grandiflora
Cagra.4395s0116 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 456917-461916 Capsella grandiflora
Cagra.4395s0116 5.0kb downstream 5.0kb downstream 10001 true Scaffold4395: 461917-471917 Capsella grandiflora
Cagra.4395s0116 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 466918-471917 Capsella grandiflora
Cagra.4395s0116 10.0kb upstream 10.0kb upstream 15001 true Scaffold4395: 451917-466917 Capsella grandiflora
Cagra.4395s0116 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 451917-461916 Capsella grandiflora
Cagra.4395s0116 10.0kb downstream 10.0kb downstream 15001 true Scaffold4395: 461917-476917 Capsella grandiflora
Cagra.4395s0116 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 466918-476917 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366664 5261 Brassicaceae View MSA
123834477 5264 Brassicales-Malvales View MSA
124343809 5266 SBM View MSA
124243047 5268 Malvidae View MSA
124063823 5270 Rosid View MSA
123752002 5271 Pentapetalae View MSA
122786521 5272 Eudicot View MSA
122048080 5273 Angiosperm View MSA
121346076 5274 Embryophyte View MSA
123424744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain