Gene : Cagra.4395s0121 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11183:SF59 - GALACTINOL SYNTHASE 2-RELATED Genomic Order:  121
Name:  ? Cagra.4395s0121 Secondary Identifier:  ? PAC:28898316
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5337 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0121 0.5kb upstream 0.5kb upstream 2127 true Scaffold4395: 478977-481103 Capsella grandiflora
Cagra.4395s0121 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 478977-479476 Capsella grandiflora
Cagra.4395s0121 0.5kb downstream 0.5kb downstream 2127 true Scaffold4395: 479477-481603 Capsella grandiflora
Cagra.4395s0121 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 481104-481603 Capsella grandiflora
Cagra.4395s0121 1.0kb upstream 1.0kb upstream 2627 true Scaffold4395: 478477-481103 Capsella grandiflora
Cagra.4395s0121 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 478477-479476 Capsella grandiflora
Cagra.4395s0121 1.0kb downstream 1.0kb downstream 2627 true Scaffold4395: 479477-482103 Capsella grandiflora
Cagra.4395s0121 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 481104-482103 Capsella grandiflora
Cagra.4395s0121 2.0kb upstream 2.0kb upstream 3627 true Scaffold4395: 477477-481103 Capsella grandiflora
Cagra.4395s0121 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 477477-479476 Capsella grandiflora
Cagra.4395s0121 2.0kb downstream 2.0kb downstream 3627 true Scaffold4395: 479477-483103 Capsella grandiflora
Cagra.4395s0121 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 481104-483103 Capsella grandiflora
Cagra.4395s0121 5.0kb upstream 5.0kb upstream 6627 true Scaffold4395: 474477-481103 Capsella grandiflora
Cagra.4395s0121 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 474477-479476 Capsella grandiflora
Cagra.4395s0121 5.0kb downstream 5.0kb downstream 6627 true Scaffold4395: 479477-486103 Capsella grandiflora
Cagra.4395s0121 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 481104-486103 Capsella grandiflora
Cagra.4395s0121 10.0kb upstream 10.0kb upstream 11627 true Scaffold4395: 469477-481103 Capsella grandiflora
Cagra.4395s0121 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 469477-479476 Capsella grandiflora
Cagra.4395s0121 10.0kb downstream 10.0kb downstream 11627 true Scaffold4395: 479477-491103 Capsella grandiflora
Cagra.4395s0121 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 481104-491103 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363208 5261 Brassicaceae View MSA
123841636 5264 Brassicales-Malvales View MSA
124338100 5266 SBM View MSA
124253823 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain