Gene : Cagra.4354s0020 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24015:SF562 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  20
Name:  ? Cagra.4354s0020 Secondary Identifier:  ? PAC:28914634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4354s0020 0.5kb upstream 0.5kb upstream 2050 true Scaffold4354: 59115-61164 Capsella grandiflora
Cagra.4354s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold4354: 60665-61164 Capsella grandiflora
Cagra.4354s0020 0.5kb downstream 0.5kb downstream 2050 true Scaffold4354: 58615-60664 Capsella grandiflora
Cagra.4354s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold4354: 58615-59114 Capsella grandiflora
Cagra.4354s0020 1.0kb upstream 1.0kb upstream 2550 true Scaffold4354: 59115-61664 Capsella grandiflora
Cagra.4354s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold4354: 60665-61664 Capsella grandiflora
Cagra.4354s0020 1.0kb downstream 1.0kb downstream 2550 true Scaffold4354: 58115-60664 Capsella grandiflora
Cagra.4354s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold4354: 58115-59114 Capsella grandiflora
Cagra.4354s0020 2.0kb upstream 2.0kb upstream 3550 true Scaffold4354: 59115-62664 Capsella grandiflora
Cagra.4354s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold4354: 60665-62664 Capsella grandiflora
Cagra.4354s0020 2.0kb downstream 2.0kb downstream 3550 true Scaffold4354: 57115-60664 Capsella grandiflora
Cagra.4354s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold4354: 57115-59114 Capsella grandiflora
Cagra.4354s0020 5.0kb upstream 5.0kb upstream 6550 true Scaffold4354: 59115-65664 Capsella grandiflora
Cagra.4354s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold4354: 60665-65664 Capsella grandiflora
Cagra.4354s0020 5.0kb downstream 5.0kb downstream 6550 true Scaffold4354: 54115-60664 Capsella grandiflora
Cagra.4354s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold4354: 54115-59114 Capsella grandiflora
Cagra.4354s0020 10.0kb upstream 10.0kb upstream 11550 true Scaffold4354: 59115-70664 Capsella grandiflora
Cagra.4354s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold4354: 60665-70664 Capsella grandiflora
Cagra.4354s0020 10.0kb downstream 10.0kb downstream 11550 true Scaffold4354: 49115-60664 Capsella grandiflora
Cagra.4354s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold4354: 49115-59114 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343297 5261 Brassicaceae View MSA
123831320 5264 Brassicales-Malvales View MSA
124321722 5266 SBM View MSA
124244514 5268 Malvidae View MSA
124062138 5270 Rosid View MSA
123738772 5271 Pentapetalae View MSA
122795104 5272 Eudicot View MSA
122042665 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121309997 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain