Gene : Cagra.4395s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10625:SF121 - HISTONE DEACETYLASE 8 Genomic Order:  35
Name:  ? Cagra.4395s0035 Secondary Identifier:  ? PAC:28898455
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0035 0.5kb upstream 0.5kb upstream 2702 true Scaffold4395: 140452-143153 Capsella grandiflora
Cagra.4395s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 140452-140951 Capsella grandiflora
Cagra.4395s0035 0.5kb downstream 0.5kb downstream 2702 true Scaffold4395: 140952-143653 Capsella grandiflora
Cagra.4395s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 143154-143653 Capsella grandiflora
Cagra.4395s0035 1.0kb upstream 1.0kb upstream 3202 true Scaffold4395: 139952-143153 Capsella grandiflora
Cagra.4395s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 139952-140951 Capsella grandiflora
Cagra.4395s0035 1.0kb downstream 1.0kb downstream 3202 true Scaffold4395: 140952-144153 Capsella grandiflora
Cagra.4395s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 143154-144153 Capsella grandiflora
Cagra.4395s0035 2.0kb upstream 2.0kb upstream 4202 true Scaffold4395: 138952-143153 Capsella grandiflora
Cagra.4395s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 138952-140951 Capsella grandiflora
Cagra.4395s0035 2.0kb downstream 2.0kb downstream 4202 true Scaffold4395: 140952-145153 Capsella grandiflora
Cagra.4395s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 143154-145153 Capsella grandiflora
Cagra.4395s0035 5.0kb upstream 5.0kb upstream 7202 true Scaffold4395: 135952-143153 Capsella grandiflora
Cagra.4395s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 135952-140951 Capsella grandiflora
Cagra.4395s0035 5.0kb downstream 5.0kb downstream 7202 true Scaffold4395: 140952-148153 Capsella grandiflora
Cagra.4395s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 143154-148153 Capsella grandiflora
Cagra.4395s0035 10.0kb upstream 10.0kb upstream 12202 true Scaffold4395: 130952-143153 Capsella grandiflora
Cagra.4395s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 130952-140951 Capsella grandiflora
Cagra.4395s0035 10.0kb downstream 10.0kb downstream 12202 true Scaffold4395: 140952-153153 Capsella grandiflora
Cagra.4395s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 143154-153153 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362711 5261 Brassicaceae View MSA
123835363 5264 Brassicales-Malvales View MSA
124341397 5266 SBM View MSA
124237256 5268 Malvidae View MSA
124068185 5270 Rosid View MSA
123739606 5271 Pentapetalae View MSA
122786493 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain