Gene : Cagra.4395s0042 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10338:SF126 - MAGNESIUM-CHELATASE SUBUNIT CHLD, CHLOROPLASTIC Genomic Order:  42
Name:  ? Cagra.4395s0042 Secondary Identifier:  ? PAC:28898339
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CHLOROPHYLL-SYN Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0042 0.5kb upstream 0.5kb upstream 5573 true Scaffold4395: 166756-172328 Capsella grandiflora
Cagra.4395s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 166756-167255 Capsella grandiflora
Cagra.4395s0042 0.5kb downstream 0.5kb downstream 5573 true Scaffold4395: 167256-172828 Capsella grandiflora
Cagra.4395s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 172329-172828 Capsella grandiflora
Cagra.4395s0042 1.0kb upstream 1.0kb upstream 6073 true Scaffold4395: 166256-172328 Capsella grandiflora
Cagra.4395s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 166256-167255 Capsella grandiflora
Cagra.4395s0042 1.0kb downstream 1.0kb downstream 6073 true Scaffold4395: 167256-173328 Capsella grandiflora
Cagra.4395s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 172329-173328 Capsella grandiflora
Cagra.4395s0042 2.0kb upstream 2.0kb upstream 7073 true Scaffold4395: 165256-172328 Capsella grandiflora
Cagra.4395s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 165256-167255 Capsella grandiflora
Cagra.4395s0042 2.0kb downstream 2.0kb downstream 7073 true Scaffold4395: 167256-174328 Capsella grandiflora
Cagra.4395s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 172329-174328 Capsella grandiflora
Cagra.4395s0042 5.0kb upstream 5.0kb upstream 10073 true Scaffold4395: 162256-172328 Capsella grandiflora
Cagra.4395s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 162256-167255 Capsella grandiflora
Cagra.4395s0042 5.0kb downstream 5.0kb downstream 10073 true Scaffold4395: 167256-177328 Capsella grandiflora
Cagra.4395s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 172329-177328 Capsella grandiflora
Cagra.4395s0042 10.0kb upstream 10.0kb upstream 15073 true Scaffold4395: 157256-172328 Capsella grandiflora
Cagra.4395s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 157256-167255 Capsella grandiflora
Cagra.4395s0042 10.0kb downstream 10.0kb downstream 15073 true Scaffold4395: 167256-182328 Capsella grandiflora
Cagra.4395s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 172329-182328 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026552 5273 Angiosperm View MSA
122372347 5261 Brassicaceae View MSA
123834198 5264 Brassicales-Malvales View MSA
124337971 5266 SBM View MSA
124238694 5268 Malvidae View MSA
124050211 5270 Rosid View MSA
123740767 5271 Pentapetalae View MSA
122793676 5272 Eudicot View MSA
121344824 5274 Embryophyte View MSA
123424530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain