Gene : Cagra.4396s0039 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24115:SF417 - PHRAGMOPLAST ORIENTING KINESIN-1 Genomic Order:  39
Name:  ? Cagra.4396s0039 Secondary Identifier:  ? PAC:28918050
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4396s0039 0.5kb upstream 0.5kb upstream 11150 true Scaffold4396: 133834-144983 Capsella grandiflora
Cagra.4396s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold4396: 133834-134333 Capsella grandiflora
Cagra.4396s0039 0.5kb downstream 0.5kb downstream 11150 true Scaffold4396: 134334-145483 Capsella grandiflora
Cagra.4396s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold4396: 144984-145483 Capsella grandiflora
Cagra.4396s0039 1.0kb upstream 1.0kb upstream 11650 true Scaffold4396: 133334-144983 Capsella grandiflora
Cagra.4396s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold4396: 133334-134333 Capsella grandiflora
Cagra.4396s0039 1.0kb downstream 1.0kb downstream 11650 true Scaffold4396: 134334-145983 Capsella grandiflora
Cagra.4396s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold4396: 144984-145983 Capsella grandiflora
Cagra.4396s0039 2.0kb upstream 2.0kb upstream 12650 true Scaffold4396: 132334-144983 Capsella grandiflora
Cagra.4396s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold4396: 132334-134333 Capsella grandiflora
Cagra.4396s0039 2.0kb downstream 2.0kb downstream 12650 true Scaffold4396: 134334-146983 Capsella grandiflora
Cagra.4396s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold4396: 144984-146983 Capsella grandiflora
Cagra.4396s0039 5.0kb upstream 5.0kb upstream 15650 true Scaffold4396: 129334-144983 Capsella grandiflora
Cagra.4396s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold4396: 129334-134333 Capsella grandiflora
Cagra.4396s0039 5.0kb downstream 5.0kb downstream 15650 true Scaffold4396: 134334-149983 Capsella grandiflora
Cagra.4396s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold4396: 144984-149983 Capsella grandiflora
Cagra.4396s0039 10.0kb upstream 10.0kb upstream 20650 true Scaffold4396: 124334-144983 Capsella grandiflora
Cagra.4396s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold4396: 124334-134333 Capsella grandiflora
Cagra.4396s0039 10.0kb downstream 10.0kb downstream 20650 true Scaffold4396: 134334-154983 Capsella grandiflora
Cagra.4396s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold4396: 144984-154983 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367667 5261 Brassicaceae View MSA
123835530 5264 Brassicales-Malvales View MSA
124344439 5266 SBM View MSA
124238273 5268 Malvidae View MSA
124060922 5270 Rosid View MSA
123749768 5271 Pentapetalae View MSA
122792500 5272 Eudicot View MSA
122048551 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350480 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain