Gene : Cagra.4396s0053 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11229 - 50S RIBOSOMAL PROTEIN L3 Genomic Order:  53
Name:  ? Cagra.4396s0053 Secondary Identifier:  ? PAC:28918030
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4396s0053 0.5kb upstream 0.5kb upstream 2372 true Scaffold4396: 184573-186944 Capsella grandiflora
Cagra.4396s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold4396: 186445-186944 Capsella grandiflora
Cagra.4396s0053 0.5kb downstream 0.5kb downstream 2372 true Scaffold4396: 184073-186444 Capsella grandiflora
Cagra.4396s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold4396: 184073-184572 Capsella grandiflora
Cagra.4396s0053 1.0kb upstream 1.0kb upstream 2872 true Scaffold4396: 184573-187444 Capsella grandiflora
Cagra.4396s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold4396: 186445-187444 Capsella grandiflora
Cagra.4396s0053 1.0kb downstream 1.0kb downstream 2872 true Scaffold4396: 183573-186444 Capsella grandiflora
Cagra.4396s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold4396: 183573-184572 Capsella grandiflora
Cagra.4396s0053 2.0kb upstream 2.0kb upstream 3872 true Scaffold4396: 184573-188444 Capsella grandiflora
Cagra.4396s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold4396: 186445-188444 Capsella grandiflora
Cagra.4396s0053 2.0kb downstream 2.0kb downstream 3872 true Scaffold4396: 182573-186444 Capsella grandiflora
Cagra.4396s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold4396: 182573-184572 Capsella grandiflora
Cagra.4396s0053 5.0kb upstream 5.0kb upstream 6872 true Scaffold4396: 184573-191444 Capsella grandiflora
Cagra.4396s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold4396: 186445-191444 Capsella grandiflora
Cagra.4396s0053 5.0kb downstream 5.0kb downstream 6872 true Scaffold4396: 179573-186444 Capsella grandiflora
Cagra.4396s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold4396: 179573-184572 Capsella grandiflora
Cagra.4396s0053 10.0kb upstream 10.0kb upstream 11872 true Scaffold4396: 184573-196444 Capsella grandiflora
Cagra.4396s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold4396: 186445-196444 Capsella grandiflora
Cagra.4396s0053 10.0kb downstream 10.0kb downstream 11872 true Scaffold4396: 174573-186444 Capsella grandiflora
Cagra.4396s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold4396: 174573-184572 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041501 5273 Angiosperm View MSA
122366871 5261 Brassicaceae View MSA
123827405 5264 Brassicales-Malvales View MSA
124339990 5266 SBM View MSA
124240515 5268 Malvidae View MSA
124071228 5270 Rosid View MSA
123739154 5271 Pentapetalae View MSA
122789035 5272 Eudicot View MSA
121347550 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain