Gene : Cagra.4399s0004 C. grandiflora v1.1
Defline:  (1 of 361) PF01535 - PPR repeat (PPR) Genomic Order:  4
Name:  ? Cagra.4399s0004 Secondary Identifier:  ? PAC:28901993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4399s0004 0.5kb upstream 0.5kb upstream 2219 true Scaffold4399: 5988-8206 Capsella grandiflora
Cagra.4399s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4399: 7707-8206 Capsella grandiflora
Cagra.4399s0004 0.5kb downstream 0.5kb downstream 2219 true Scaffold4399: 5488-7706 Capsella grandiflora
Cagra.4399s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4399: 5488-5987 Capsella grandiflora
Cagra.4399s0004 1.0kb upstream 1.0kb upstream 2719 true Scaffold4399: 5988-8706 Capsella grandiflora
Cagra.4399s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4399: 7707-8706 Capsella grandiflora
Cagra.4399s0004 1.0kb downstream 1.0kb downstream 2719 true Scaffold4399: 4988-7706 Capsella grandiflora
Cagra.4399s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4399: 4988-5987 Capsella grandiflora
Cagra.4399s0004 2.0kb upstream 2.0kb upstream 3719 true Scaffold4399: 5988-9706 Capsella grandiflora
Cagra.4399s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4399: 7707-9706 Capsella grandiflora
Cagra.4399s0004 2.0kb downstream 2.0kb downstream 3719 true Scaffold4399: 3988-7706 Capsella grandiflora
Cagra.4399s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4399: 3988-5987 Capsella grandiflora
Cagra.4399s0004 5.0kb upstream 5.0kb upstream 6719 true Scaffold4399: 5988-12706 Capsella grandiflora
Cagra.4399s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4399: 7707-12706 Capsella grandiflora
Cagra.4399s0004 5.0kb downstream 5.0kb downstream 6719 true Scaffold4399: 988-7706 Capsella grandiflora
Cagra.4399s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4399: 988-5987 Capsella grandiflora
Cagra.4399s0004 10.0kb upstream 10.0kb upstream 11719 true Scaffold4399: 5988-17706 Capsella grandiflora
Cagra.4399s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4399: 7707-17706 Capsella grandiflora
Cagra.4399s0004 10.0kb downstream 10.0kb downstream 7706 true Scaffold4399: 1-7706 Capsella grandiflora
Cagra.4399s0004 10.0kb downstream 10.0kb downstream 5987 false Scaffold4399: 1-5987 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376440 5261 Brassicaceae View MSA
123829670 5264 Brassicales-Malvales View MSA
124343185 5266 SBM View MSA
124239016 5268 Malvidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain