Gene : Cagra.4399s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12804 - MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 Genomic Order:  1
Name:  ? Cagra.4399s0001 Secondary Identifier:  ? PAC:28901972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4399s0001 0.5kb upstream 0.5kb upstream 1980 true Scaffold4399: 1-1980 Capsella grandiflora
Cagra.4399s0001 0.5kb upstream 0.5kb upstream 64 false Scaffold4399: 1-64 Capsella grandiflora
Cagra.4399s0001 0.5kb downstream 0.5kb downstream 2416 true Scaffold4399: 65-2480 Capsella grandiflora
Cagra.4399s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4399: 1981-2480 Capsella grandiflora
Cagra.4399s0001 1.0kb upstream 1.0kb upstream 1980 true Scaffold4399: 1-1980 Capsella grandiflora
Cagra.4399s0001 1.0kb upstream 1.0kb upstream 64 false Scaffold4399: 1-64 Capsella grandiflora
Cagra.4399s0001 1.0kb downstream 1.0kb downstream 2916 true Scaffold4399: 65-2980 Capsella grandiflora
Cagra.4399s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4399: 1981-2980 Capsella grandiflora
Cagra.4399s0001 2.0kb upstream 2.0kb upstream 1980 true Scaffold4399: 1-1980 Capsella grandiflora
Cagra.4399s0001 2.0kb upstream 2.0kb upstream 64 false Scaffold4399: 1-64 Capsella grandiflora
Cagra.4399s0001 2.0kb downstream 2.0kb downstream 3916 true Scaffold4399: 65-3980 Capsella grandiflora
Cagra.4399s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4399: 1981-3980 Capsella grandiflora
Cagra.4399s0001 5.0kb upstream 5.0kb upstream 1980 true Scaffold4399: 1-1980 Capsella grandiflora
Cagra.4399s0001 5.0kb upstream 5.0kb upstream 64 false Scaffold4399: 1-64 Capsella grandiflora
Cagra.4399s0001 5.0kb downstream 5.0kb downstream 6916 true Scaffold4399: 65-6980 Capsella grandiflora
Cagra.4399s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4399: 1981-6980 Capsella grandiflora
Cagra.4399s0001 10.0kb upstream 10.0kb upstream 1980 true Scaffold4399: 1-1980 Capsella grandiflora
Cagra.4399s0001 10.0kb upstream 10.0kb upstream 64 false Scaffold4399: 1-64 Capsella grandiflora
Cagra.4399s0001 10.0kb downstream 10.0kb downstream 11916 true Scaffold4399: 65-11980 Capsella grandiflora
Cagra.4399s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4399: 1981-11980 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377083 5261 Brassicaceae View MSA
123839955 5264 Brassicales-Malvales View MSA
124347240 5266 SBM View MSA
124241687 5268 Malvidae View MSA
124062691 5270 Rosid View MSA
123748290 5271 Pentapetalae View MSA
122794035 5272 Eudicot View MSA
122042946 5273 Angiosperm View MSA
121344173 5274 Embryophyte View MSA
123424952 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain