Gene : Cagra.4399s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21689:SF3 - PROTEIN ALWAYS EARLY 1-RELATED Genomic Order:  14
Name:  ? Cagra.4399s0014 Secondary Identifier:  ? PAC:28901970
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4399s0014 0.5kb upstream 0.5kb upstream 6463 true Scaffold4399: 38392-44854 Capsella grandiflora
Cagra.4399s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold4399: 38392-38891 Capsella grandiflora
Cagra.4399s0014 0.5kb downstream 0.5kb downstream 6463 true Scaffold4399: 38892-45354 Capsella grandiflora
Cagra.4399s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold4399: 44855-45354 Capsella grandiflora
Cagra.4399s0014 1.0kb upstream 1.0kb upstream 6963 true Scaffold4399: 37892-44854 Capsella grandiflora
Cagra.4399s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold4399: 37892-38891 Capsella grandiflora
Cagra.4399s0014 1.0kb downstream 1.0kb downstream 6963 true Scaffold4399: 38892-45854 Capsella grandiflora
Cagra.4399s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold4399: 44855-45854 Capsella grandiflora
Cagra.4399s0014 2.0kb upstream 2.0kb upstream 7963 true Scaffold4399: 36892-44854 Capsella grandiflora
Cagra.4399s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold4399: 36892-38891 Capsella grandiflora
Cagra.4399s0014 2.0kb downstream 2.0kb downstream 7963 true Scaffold4399: 38892-46854 Capsella grandiflora
Cagra.4399s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold4399: 44855-46854 Capsella grandiflora
Cagra.4399s0014 5.0kb upstream 5.0kb upstream 10963 true Scaffold4399: 33892-44854 Capsella grandiflora
Cagra.4399s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold4399: 33892-38891 Capsella grandiflora
Cagra.4399s0014 5.0kb downstream 5.0kb downstream 10963 true Scaffold4399: 38892-49854 Capsella grandiflora
Cagra.4399s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold4399: 44855-49854 Capsella grandiflora
Cagra.4399s0014 10.0kb upstream 10.0kb upstream 15963 true Scaffold4399: 28892-44854 Capsella grandiflora
Cagra.4399s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold4399: 28892-38891 Capsella grandiflora
Cagra.4399s0014 10.0kb downstream 10.0kb downstream 15963 true Scaffold4399: 38892-54854 Capsella grandiflora
Cagra.4399s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold4399: 44855-54854 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040981 5273 Angiosperm View MSA
122377971 5261 Brassicaceae View MSA
123801690 5264 Brassicales-Malvales View MSA
124350607 5266 SBM View MSA
124253154 5268 Malvidae View MSA
124072139 5270 Rosid View MSA
123744019 5271 Pentapetalae View MSA
122796198 5272 Eudicot View MSA
121349318 5274 Embryophyte View MSA
123424502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain