Gene : Cagra.4326s0007 C. grandiflora v1.1
Defline:  (1 of 1) 3.6.1.19 - Nucleoside-triphosphate diphosphatase / Nucleoside-triphosphate pyrophosphatase Genomic Order:  7
Name:  ? Cagra.4326s0007 Secondary Identifier:  ? PAC:28906075
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6545 Capsella grandiflora pathologic  
Cgrandiflora PWY-7184 Capsella grandiflora pathologic  
Cgrandiflora PWY-7206 Capsella grandiflora pathologic  
Cgrandiflora PWY-7211 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4326s0007 0.5kb upstream 0.5kb upstream 2432 true Scaffold4326: 36887-39318 Capsella grandiflora
Cagra.4326s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold4326: 36887-37386 Capsella grandiflora
Cagra.4326s0007 0.5kb downstream 0.5kb downstream 2432 true Scaffold4326: 37387-39818 Capsella grandiflora
Cagra.4326s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold4326: 39319-39818 Capsella grandiflora
Cagra.4326s0007 1.0kb upstream 1.0kb upstream 2932 true Scaffold4326: 36387-39318 Capsella grandiflora
Cagra.4326s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold4326: 36387-37386 Capsella grandiflora
Cagra.4326s0007 1.0kb downstream 1.0kb downstream 2932 true Scaffold4326: 37387-40318 Capsella grandiflora
Cagra.4326s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold4326: 39319-40318 Capsella grandiflora
Cagra.4326s0007 2.0kb upstream 2.0kb upstream 3932 true Scaffold4326: 35387-39318 Capsella grandiflora
Cagra.4326s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold4326: 35387-37386 Capsella grandiflora
Cagra.4326s0007 2.0kb downstream 2.0kb downstream 3932 true Scaffold4326: 37387-41318 Capsella grandiflora
Cagra.4326s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold4326: 39319-41318 Capsella grandiflora
Cagra.4326s0007 5.0kb upstream 5.0kb upstream 6932 true Scaffold4326: 32387-39318 Capsella grandiflora
Cagra.4326s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold4326: 32387-37386 Capsella grandiflora
Cagra.4326s0007 5.0kb downstream 5.0kb downstream 6932 true Scaffold4326: 37387-44318 Capsella grandiflora
Cagra.4326s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold4326: 39319-44318 Capsella grandiflora
Cagra.4326s0007 10.0kb upstream 10.0kb upstream 11932 true Scaffold4326: 27387-39318 Capsella grandiflora
Cagra.4326s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold4326: 27387-37386 Capsella grandiflora
Cagra.4326s0007 10.0kb downstream 10.0kb downstream 11932 true Scaffold4326: 37387-49318 Capsella grandiflora
Cagra.4326s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold4326: 39319-49318 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365894 5261 Brassicaceae View MSA
123841590 5264 Brassicales-Malvales View MSA
124339466 5266 SBM View MSA
124239860 5268 Malvidae View MSA
124065206 5270 Rosid View MSA
123737786 5271 Pentapetalae View MSA
122787443 5272 Eudicot View MSA
122044439 5273 Angiosperm View MSA
121346203 5274 Embryophyte View MSA
123426243 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain