Gene : Cagra.4329s0003 C. grandiflora v1.1
Defline:  (1 of 1) 2.3.1.39 - [Acyl-carrier-protein] S-malonyltransferase / MCAT Genomic Order:  3
Name:  ? Cagra.4329s0003 Secondary Identifier:  ? PAC:28902404
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4381 Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-7388 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4329s0003 0.5kb upstream 0.5kb upstream 4531 true Scaffold4329: 12266-16796 Capsella grandiflora
Cagra.4329s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4329: 12266-12765 Capsella grandiflora
Cagra.4329s0003 0.5kb downstream 0.5kb downstream 4531 true Scaffold4329: 12766-17296 Capsella grandiflora
Cagra.4329s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4329: 16797-17296 Capsella grandiflora
Cagra.4329s0003 1.0kb upstream 1.0kb upstream 5031 true Scaffold4329: 11766-16796 Capsella grandiflora
Cagra.4329s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4329: 11766-12765 Capsella grandiflora
Cagra.4329s0003 1.0kb downstream 1.0kb downstream 5031 true Scaffold4329: 12766-17796 Capsella grandiflora
Cagra.4329s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4329: 16797-17796 Capsella grandiflora
Cagra.4329s0003 2.0kb upstream 2.0kb upstream 6031 true Scaffold4329: 10766-16796 Capsella grandiflora
Cagra.4329s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4329: 10766-12765 Capsella grandiflora
Cagra.4329s0003 2.0kb downstream 2.0kb downstream 6031 true Scaffold4329: 12766-18796 Capsella grandiflora
Cagra.4329s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4329: 16797-18796 Capsella grandiflora
Cagra.4329s0003 5.0kb upstream 5.0kb upstream 9031 true Scaffold4329: 7766-16796 Capsella grandiflora
Cagra.4329s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4329: 7766-12765 Capsella grandiflora
Cagra.4329s0003 5.0kb downstream 5.0kb downstream 9031 true Scaffold4329: 12766-21796 Capsella grandiflora
Cagra.4329s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4329: 16797-21796 Capsella grandiflora
Cagra.4329s0003 10.0kb upstream 10.0kb upstream 14031 true Scaffold4329: 2766-16796 Capsella grandiflora
Cagra.4329s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4329: 2766-12765 Capsella grandiflora
Cagra.4329s0003 10.0kb downstream 10.0kb downstream 10424 true Scaffold4329: 12766-23189 Capsella grandiflora
Cagra.4329s0003 10.0kb downstream 10.0kb downstream 6393 false Scaffold4329: 16797-23189 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041321 5273 Angiosperm View MSA
122365760 5261 Brassicaceae View MSA
123829753 5264 Brassicales-Malvales View MSA
124345768 5266 SBM View MSA
124241269 5268 Malvidae View MSA
124063933 5270 Rosid View MSA
123737538 5271 Pentapetalae View MSA
122786966 5272 Eudicot View MSA
121346030 5274 Embryophyte View MSA
123426767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain