Gene : Cagra.4328s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10741:SF5 - TRANSLIN-ASSOCIATED PROTEIN X Genomic Order:  2
Name:  ? Cagra.4328s0002 Secondary Identifier:  ? PAC:28894783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4328s0002 0.5kb upstream 0.5kb upstream 1286 true Scaffold4328: 5578-6863 Capsella grandiflora
Cagra.4328s0002 0.5kb upstream 0.5kb upstream 8 false Scaffold4328: 6856-6863 Capsella grandiflora
Cagra.4328s0002 0.5kb downstream 0.5kb downstream 1778 true Scaffold4328: 5078-6855 Capsella grandiflora
Cagra.4328s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4328: 5078-5577 Capsella grandiflora
Cagra.4328s0002 1.0kb upstream 1.0kb upstream 1286 true Scaffold4328: 5578-6863 Capsella grandiflora
Cagra.4328s0002 1.0kb upstream 1.0kb upstream 8 false Scaffold4328: 6856-6863 Capsella grandiflora
Cagra.4328s0002 1.0kb downstream 1.0kb downstream 2278 true Scaffold4328: 4578-6855 Capsella grandiflora
Cagra.4328s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4328: 4578-5577 Capsella grandiflora
Cagra.4328s0002 2.0kb upstream 2.0kb upstream 1286 true Scaffold4328: 5578-6863 Capsella grandiflora
Cagra.4328s0002 2.0kb upstream 2.0kb upstream 8 false Scaffold4328: 6856-6863 Capsella grandiflora
Cagra.4328s0002 2.0kb downstream 2.0kb downstream 3278 true Scaffold4328: 3578-6855 Capsella grandiflora
Cagra.4328s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4328: 3578-5577 Capsella grandiflora
Cagra.4328s0002 5.0kb upstream 5.0kb upstream 1286 true Scaffold4328: 5578-6863 Capsella grandiflora
Cagra.4328s0002 5.0kb upstream 5.0kb upstream 8 false Scaffold4328: 6856-6863 Capsella grandiflora
Cagra.4328s0002 5.0kb downstream 5.0kb downstream 6278 true Scaffold4328: 578-6855 Capsella grandiflora
Cagra.4328s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4328: 578-5577 Capsella grandiflora
Cagra.4328s0002 10.0kb upstream 10.0kb upstream 1286 true Scaffold4328: 5578-6863 Capsella grandiflora
Cagra.4328s0002 10.0kb upstream 10.0kb upstream 8 false Scaffold4328: 6856-6863 Capsella grandiflora
Cagra.4328s0002 10.0kb downstream 10.0kb downstream 6855 true Scaffold4328: 1-6855 Capsella grandiflora
Cagra.4328s0002 10.0kb downstream 10.0kb downstream 5577 false Scaffold4328: 1-5577 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333764 5261 Brassicaceae Singleton cluster - no MSA
123774672 5264 Brassicales-Malvales Singleton cluster - no MSA
124349785 5266 SBM View MSA
124243030 5268 Malvidae View MSA
124067948 5270 Rosid View MSA
123752005 5271 Pentapetalae View MSA
122788507 5272 Eudicot View MSA
122041771 5273 Angiosperm View MSA
121345786 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain