Gene : Cagra.4396s0002 C. grandiflora v1.1
Defline:  (1 of 4) 1.8.1.4 - Dihydrolipoyl dehydrogenase / Lipoyl dehydrogenase Genomic Order:  2
Name:  ? Cagra.4396s0002 Secondary Identifier:  ? PAC:28918033
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLYCLEAV-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5046 Capsella grandiflora pathologic  
Cgrandiflora PWY-5084 Capsella grandiflora pathologic  
Cgrandiflora PWY-5173 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PYRUVDEHYD-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4396s0002 0.5kb upstream 0.5kb upstream 4811 true Scaffold4396: 11320-16130 Capsella grandiflora
Cagra.4396s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4396: 15631-16130 Capsella grandiflora
Cagra.4396s0002 0.5kb downstream 0.5kb downstream 4811 true Scaffold4396: 10820-15630 Capsella grandiflora
Cagra.4396s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4396: 10820-11319 Capsella grandiflora
Cagra.4396s0002 1.0kb upstream 1.0kb upstream 5311 true Scaffold4396: 11320-16630 Capsella grandiflora
Cagra.4396s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4396: 15631-16630 Capsella grandiflora
Cagra.4396s0002 1.0kb downstream 1.0kb downstream 5311 true Scaffold4396: 10320-15630 Capsella grandiflora
Cagra.4396s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4396: 10320-11319 Capsella grandiflora
Cagra.4396s0002 2.0kb upstream 2.0kb upstream 6311 true Scaffold4396: 11320-17630 Capsella grandiflora
Cagra.4396s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4396: 15631-17630 Capsella grandiflora
Cagra.4396s0002 2.0kb downstream 2.0kb downstream 6311 true Scaffold4396: 9320-15630 Capsella grandiflora
Cagra.4396s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4396: 9320-11319 Capsella grandiflora
Cagra.4396s0002 5.0kb upstream 5.0kb upstream 9311 true Scaffold4396: 11320-20630 Capsella grandiflora
Cagra.4396s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4396: 15631-20630 Capsella grandiflora
Cagra.4396s0002 5.0kb downstream 5.0kb downstream 9311 true Scaffold4396: 6320-15630 Capsella grandiflora
Cagra.4396s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4396: 6320-11319 Capsella grandiflora
Cagra.4396s0002 10.0kb upstream 10.0kb upstream 14311 true Scaffold4396: 11320-25630 Capsella grandiflora
Cagra.4396s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold4396: 15631-25630 Capsella grandiflora
Cagra.4396s0002 10.0kb downstream 10.0kb downstream 14311 true Scaffold4396: 1320-15630 Capsella grandiflora
Cagra.4396s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4396: 1320-11319 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041061 5273 Angiosperm View MSA
122369982 5261 Brassicaceae View MSA
123840635 5264 Brassicales-Malvales View MSA
124339506 5266 SBM View MSA
124241622 5268 Malvidae View MSA
124065612 5270 Rosid View MSA
123745310 5271 Pentapetalae View MSA
122789628 5272 Eudicot View MSA
121346469 5274 Embryophyte View MSA
123424550 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain