Gene : Cagra.4396s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33178:SF2 - PROTEIN POP3-RELATED Genomic Order:  27
Name:  ? Cagra.4396s0027 Secondary Identifier:  ? PAC:28918032
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4396s0027 0.5kb upstream 0.5kb upstream 1354 true Scaffold4396: 97169-98522 Capsella grandiflora
Cagra.4396s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold4396: 97169-97668 Capsella grandiflora
Cagra.4396s0027 0.5kb downstream 0.5kb downstream 1354 true Scaffold4396: 97669-99022 Capsella grandiflora
Cagra.4396s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold4396: 98523-99022 Capsella grandiflora
Cagra.4396s0027 1.0kb upstream 1.0kb upstream 1854 true Scaffold4396: 96669-98522 Capsella grandiflora
Cagra.4396s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold4396: 96669-97668 Capsella grandiflora
Cagra.4396s0027 1.0kb downstream 1.0kb downstream 1854 true Scaffold4396: 97669-99522 Capsella grandiflora
Cagra.4396s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold4396: 98523-99522 Capsella grandiflora
Cagra.4396s0027 2.0kb upstream 2.0kb upstream 2854 true Scaffold4396: 95669-98522 Capsella grandiflora
Cagra.4396s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold4396: 95669-97668 Capsella grandiflora
Cagra.4396s0027 2.0kb downstream 2.0kb downstream 2854 true Scaffold4396: 97669-100522 Capsella grandiflora
Cagra.4396s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold4396: 98523-100522 Capsella grandiflora
Cagra.4396s0027 5.0kb upstream 5.0kb upstream 5854 true Scaffold4396: 92669-98522 Capsella grandiflora
Cagra.4396s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold4396: 92669-97668 Capsella grandiflora
Cagra.4396s0027 5.0kb downstream 5.0kb downstream 5854 true Scaffold4396: 97669-103522 Capsella grandiflora
Cagra.4396s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold4396: 98523-103522 Capsella grandiflora
Cagra.4396s0027 10.0kb upstream 10.0kb upstream 10854 true Scaffold4396: 87669-98522 Capsella grandiflora
Cagra.4396s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold4396: 87669-97668 Capsella grandiflora
Cagra.4396s0027 10.0kb downstream 10.0kb downstream 10854 true Scaffold4396: 97669-108522 Capsella grandiflora
Cagra.4396s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold4396: 98523-108522 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373893 5261 Brassicaceae View MSA
123834910 5264 Brassicales-Malvales View MSA
124338744 5266 SBM View MSA
124250136 5268 Malvidae View MSA
124065488 5270 Rosid View MSA
123749354 5271 Pentapetalae View MSA
122788485 5272 Eudicot View MSA
122046282 5273 Angiosperm View MSA
121347337 5274 Embryophyte View MSA
123380530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain