Gene : Cagra.4396s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23068//PTHR23068:SF11 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Genomic Order:  35
Name:  ? Cagra.4396s0035 Secondary Identifier:  ? PAC:28918022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4396s0035 0.5kb upstream 0.5kb upstream 4931 true Scaffold4396: 113961-118891 Capsella grandiflora
Cagra.4396s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold4396: 118392-118891 Capsella grandiflora
Cagra.4396s0035 0.5kb downstream 0.5kb downstream 4931 true Scaffold4396: 113461-118391 Capsella grandiflora
Cagra.4396s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold4396: 113461-113960 Capsella grandiflora
Cagra.4396s0035 1.0kb upstream 1.0kb upstream 5431 true Scaffold4396: 113961-119391 Capsella grandiflora
Cagra.4396s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold4396: 118392-119391 Capsella grandiflora
Cagra.4396s0035 1.0kb downstream 1.0kb downstream 5431 true Scaffold4396: 112961-118391 Capsella grandiflora
Cagra.4396s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold4396: 112961-113960 Capsella grandiflora
Cagra.4396s0035 2.0kb upstream 2.0kb upstream 6431 true Scaffold4396: 113961-120391 Capsella grandiflora
Cagra.4396s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold4396: 118392-120391 Capsella grandiflora
Cagra.4396s0035 2.0kb downstream 2.0kb downstream 6431 true Scaffold4396: 111961-118391 Capsella grandiflora
Cagra.4396s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold4396: 111961-113960 Capsella grandiflora
Cagra.4396s0035 5.0kb upstream 5.0kb upstream 9431 true Scaffold4396: 113961-123391 Capsella grandiflora
Cagra.4396s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold4396: 118392-123391 Capsella grandiflora
Cagra.4396s0035 5.0kb downstream 5.0kb downstream 9431 true Scaffold4396: 108961-118391 Capsella grandiflora
Cagra.4396s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold4396: 108961-113960 Capsella grandiflora
Cagra.4396s0035 10.0kb upstream 10.0kb upstream 14431 true Scaffold4396: 113961-128391 Capsella grandiflora
Cagra.4396s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold4396: 118392-128391 Capsella grandiflora
Cagra.4396s0035 10.0kb downstream 10.0kb downstream 14431 true Scaffold4396: 103961-118391 Capsella grandiflora
Cagra.4396s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold4396: 103961-113960 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361311 5261 Brassicaceae View MSA
123828684 5264 Brassicales-Malvales View MSA
124344928 5266 SBM View MSA
124237630 5268 Malvidae View MSA
124066884 5270 Rosid View MSA
123739152 5271 Pentapetalae View MSA
122785997 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain