Gene : Cagra.4247s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15678:SF6 - UPF0378 PROTEIN KIAA0100 Genomic Order:  17
Name:  ? Cagra.4247s0017 Secondary Identifier:  ? PAC:28913066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4247s0017 0.5kb upstream 0.5kb upstream 14779 true Scaffold4247: 73514-88292 Capsella grandiflora
Cagra.4247s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold4247: 87793-88292 Capsella grandiflora
Cagra.4247s0017 0.5kb downstream 0.5kb downstream 14779 true Scaffold4247: 73014-87792 Capsella grandiflora
Cagra.4247s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold4247: 73014-73513 Capsella grandiflora
Cagra.4247s0017 1.0kb upstream 1.0kb upstream 15279 true Scaffold4247: 73514-88792 Capsella grandiflora
Cagra.4247s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold4247: 87793-88792 Capsella grandiflora
Cagra.4247s0017 1.0kb downstream 1.0kb downstream 15279 true Scaffold4247: 72514-87792 Capsella grandiflora
Cagra.4247s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold4247: 72514-73513 Capsella grandiflora
Cagra.4247s0017 2.0kb upstream 2.0kb upstream 16279 true Scaffold4247: 73514-89792 Capsella grandiflora
Cagra.4247s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold4247: 87793-89792 Capsella grandiflora
Cagra.4247s0017 2.0kb downstream 2.0kb downstream 16279 true Scaffold4247: 71514-87792 Capsella grandiflora
Cagra.4247s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold4247: 71514-73513 Capsella grandiflora
Cagra.4247s0017 5.0kb upstream 5.0kb upstream 19279 true Scaffold4247: 73514-92792 Capsella grandiflora
Cagra.4247s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold4247: 87793-92792 Capsella grandiflora
Cagra.4247s0017 5.0kb downstream 5.0kb downstream 19279 true Scaffold4247: 68514-87792 Capsella grandiflora
Cagra.4247s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold4247: 68514-73513 Capsella grandiflora
Cagra.4247s0017 10.0kb upstream 10.0kb upstream 24279 true Scaffold4247: 73514-97792 Capsella grandiflora
Cagra.4247s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold4247: 87793-97792 Capsella grandiflora
Cagra.4247s0017 10.0kb downstream 10.0kb downstream 24279 true Scaffold4247: 63514-87792 Capsella grandiflora
Cagra.4247s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold4247: 63514-73513 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375717 5261 Brassicaceae View MSA
123839633 5264 Brassicales-Malvales View MSA
124342514 5266 SBM View MSA
124237607 5268 Malvidae View MSA
124067237 5270 Rosid View MSA
123743501 5271 Pentapetalae View MSA
122787357 5272 Eudicot View MSA
122044686 5273 Angiosperm View MSA
121349387 5274 Embryophyte View MSA
123381291 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain