Gene : Cagra.4247s0023 C. grandiflora v1.1
Defline:  (1 of 3) PTHR13812//PTHR13812:SF20 - ORNITHINE CYCLODEAMINASE-RELATED Genomic Order:  23
Name:  ? Cagra.4247s0023 Secondary Identifier:  ? PAC:28913078
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5188 Capsella grandiflora pathologic  
Cgrandiflora PWY-5918 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4247s0023 0.5kb upstream 0.5kb upstream 2981 true Scaffold4247: 106509-109489 Capsella grandiflora
Cagra.4247s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold4247: 108990-109489 Capsella grandiflora
Cagra.4247s0023 0.5kb downstream 0.5kb downstream 2981 true Scaffold4247: 106009-108989 Capsella grandiflora
Cagra.4247s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold4247: 106009-106508 Capsella grandiflora
Cagra.4247s0023 1.0kb upstream 1.0kb upstream 3481 true Scaffold4247: 106509-109989 Capsella grandiflora
Cagra.4247s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold4247: 108990-109989 Capsella grandiflora
Cagra.4247s0023 1.0kb downstream 1.0kb downstream 3481 true Scaffold4247: 105509-108989 Capsella grandiflora
Cagra.4247s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold4247: 105509-106508 Capsella grandiflora
Cagra.4247s0023 2.0kb upstream 2.0kb upstream 4481 true Scaffold4247: 106509-110989 Capsella grandiflora
Cagra.4247s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold4247: 108990-110989 Capsella grandiflora
Cagra.4247s0023 2.0kb downstream 2.0kb downstream 4481 true Scaffold4247: 104509-108989 Capsella grandiflora
Cagra.4247s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold4247: 104509-106508 Capsella grandiflora
Cagra.4247s0023 5.0kb upstream 5.0kb upstream 7481 true Scaffold4247: 106509-113989 Capsella grandiflora
Cagra.4247s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold4247: 108990-113989 Capsella grandiflora
Cagra.4247s0023 5.0kb downstream 5.0kb downstream 7481 true Scaffold4247: 101509-108989 Capsella grandiflora
Cagra.4247s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold4247: 101509-106508 Capsella grandiflora
Cagra.4247s0023 10.0kb upstream 10.0kb upstream 12481 true Scaffold4247: 106509-118989 Capsella grandiflora
Cagra.4247s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold4247: 108990-118989 Capsella grandiflora
Cagra.4247s0023 10.0kb downstream 10.0kb downstream 12481 true Scaffold4247: 96509-108989 Capsella grandiflora
Cagra.4247s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold4247: 96509-106508 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366715 5261 Brassicaceae View MSA
123829853 5264 Brassicales-Malvales View MSA
124350051 5266 SBM View MSA
124237055 5268 Malvidae View MSA
124065838 5270 Rosid View MSA
123737748 5271 Pentapetalae View MSA
122790191 5272 Eudicot View MSA
122042343 5273 Angiosperm View MSA
121344593 5274 Embryophyte View MSA
123424931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain