Gene : Cagra.4273s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10217:SF504 - POTASSIUM CHANNEL AKT1-RELATED Genomic Order:  3
Name:  ? Cagra.4273s0003 Secondary Identifier:  ? PAC:28919864
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4273s0003 0.5kb upstream 0.5kb upstream 4059 true Scaffold4273: 4485-8543 Capsella grandiflora
Cagra.4273s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4273: 8044-8543 Capsella grandiflora
Cagra.4273s0003 0.5kb downstream 0.5kb downstream 4059 true Scaffold4273: 3985-8043 Capsella grandiflora
Cagra.4273s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4273: 3985-4484 Capsella grandiflora
Cagra.4273s0003 1.0kb upstream 1.0kb upstream 4559 true Scaffold4273: 4485-9043 Capsella grandiflora
Cagra.4273s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4273: 8044-9043 Capsella grandiflora
Cagra.4273s0003 1.0kb downstream 1.0kb downstream 4559 true Scaffold4273: 3485-8043 Capsella grandiflora
Cagra.4273s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4273: 3485-4484 Capsella grandiflora
Cagra.4273s0003 2.0kb upstream 2.0kb upstream 5559 true Scaffold4273: 4485-10043 Capsella grandiflora
Cagra.4273s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4273: 8044-10043 Capsella grandiflora
Cagra.4273s0003 2.0kb downstream 2.0kb downstream 5559 true Scaffold4273: 2485-8043 Capsella grandiflora
Cagra.4273s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4273: 2485-4484 Capsella grandiflora
Cagra.4273s0003 5.0kb upstream 5.0kb upstream 8559 true Scaffold4273: 4485-13043 Capsella grandiflora
Cagra.4273s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4273: 8044-13043 Capsella grandiflora
Cagra.4273s0003 5.0kb downstream 5.0kb downstream 8043 true Scaffold4273: 1-8043 Capsella grandiflora
Cagra.4273s0003 5.0kb downstream 5.0kb downstream 4484 false Scaffold4273: 1-4484 Capsella grandiflora
Cagra.4273s0003 10.0kb upstream 10.0kb upstream 13559 true Scaffold4273: 4485-18043 Capsella grandiflora
Cagra.4273s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4273: 8044-18043 Capsella grandiflora
Cagra.4273s0003 10.0kb downstream 10.0kb downstream 8043 true Scaffold4273: 1-8043 Capsella grandiflora
Cagra.4273s0003 10.0kb downstream 10.0kb downstream 4484 false Scaffold4273: 1-4484 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071776 5270 Rosid View MSA
122366014 5261 Brassicaceae View MSA
123832043 5264 Brassicales-Malvales View MSA
124343357 5266 SBM View MSA
124253036 5268 Malvidae View MSA
123743419 5271 Pentapetalae View MSA
122788251 5272 Eudicot View MSA
122043256 5273 Angiosperm View MSA
121350921 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain