Gene : Cagra.4348s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24006:SF524 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21 Genomic Order:  3
Name:  ? Cagra.4348s0003 Secondary Identifier:  ? PAC:28920204
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4348s0003 0.5kb upstream 0.5kb upstream 2690 true Scaffold4348: 9287-11976 Capsella grandiflora
Cagra.4348s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4348: 11477-11976 Capsella grandiflora
Cagra.4348s0003 0.5kb downstream 0.5kb downstream 2690 true Scaffold4348: 8787-11476 Capsella grandiflora
Cagra.4348s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4348: 8787-9286 Capsella grandiflora
Cagra.4348s0003 1.0kb upstream 1.0kb upstream 3190 true Scaffold4348: 9287-12476 Capsella grandiflora
Cagra.4348s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4348: 11477-12476 Capsella grandiflora
Cagra.4348s0003 1.0kb downstream 1.0kb downstream 3190 true Scaffold4348: 8287-11476 Capsella grandiflora
Cagra.4348s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4348: 8287-9286 Capsella grandiflora
Cagra.4348s0003 2.0kb upstream 2.0kb upstream 4190 true Scaffold4348: 9287-13476 Capsella grandiflora
Cagra.4348s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4348: 11477-13476 Capsella grandiflora
Cagra.4348s0003 2.0kb downstream 2.0kb downstream 4190 true Scaffold4348: 7287-11476 Capsella grandiflora
Cagra.4348s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4348: 7287-9286 Capsella grandiflora
Cagra.4348s0003 5.0kb upstream 5.0kb upstream 7190 true Scaffold4348: 9287-16476 Capsella grandiflora
Cagra.4348s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4348: 11477-16476 Capsella grandiflora
Cagra.4348s0003 5.0kb downstream 5.0kb downstream 7190 true Scaffold4348: 4287-11476 Capsella grandiflora
Cagra.4348s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4348: 4287-9286 Capsella grandiflora
Cagra.4348s0003 10.0kb upstream 10.0kb upstream 12190 true Scaffold4348: 9287-21476 Capsella grandiflora
Cagra.4348s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4348: 11477-21476 Capsella grandiflora
Cagra.4348s0003 10.0kb downstream 10.0kb downstream 11476 true Scaffold4348: 1-11476 Capsella grandiflora
Cagra.4348s0003 10.0kb downstream 10.0kb downstream 9286 false Scaffold4348: 1-9286 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364282 5261 Brassicaceae View MSA
123833971 5264 Brassicales-Malvales View MSA
124339447 5266 SBM View MSA
124239827 5268 Malvidae View MSA
124072023 5270 Rosid View MSA
123753074 5271 Pentapetalae View MSA
122793383 5272 Eudicot View MSA
122050086 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121349716 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain