Gene : Cagra.4273s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12169:SF5 - AFG1-LIKE ATPASE FAMILY PROTEIN Genomic Order:  11
Name:  ? Cagra.4273s0011 Secondary Identifier:  ? PAC:28919868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4273s0011 0.5kb upstream 0.5kb upstream 3333 true Scaffold4273: 45266-48598 Capsella grandiflora
Cagra.4273s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold4273: 48099-48598 Capsella grandiflora
Cagra.4273s0011 0.5kb downstream 0.5kb downstream 3333 true Scaffold4273: 44766-48098 Capsella grandiflora
Cagra.4273s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold4273: 44766-45265 Capsella grandiflora
Cagra.4273s0011 1.0kb upstream 1.0kb upstream 3833 true Scaffold4273: 45266-49098 Capsella grandiflora
Cagra.4273s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold4273: 48099-49098 Capsella grandiflora
Cagra.4273s0011 1.0kb downstream 1.0kb downstream 3833 true Scaffold4273: 44266-48098 Capsella grandiflora
Cagra.4273s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold4273: 44266-45265 Capsella grandiflora
Cagra.4273s0011 2.0kb upstream 2.0kb upstream 4833 true Scaffold4273: 45266-50098 Capsella grandiflora
Cagra.4273s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold4273: 48099-50098 Capsella grandiflora
Cagra.4273s0011 2.0kb downstream 2.0kb downstream 4833 true Scaffold4273: 43266-48098 Capsella grandiflora
Cagra.4273s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold4273: 43266-45265 Capsella grandiflora
Cagra.4273s0011 5.0kb upstream 5.0kb upstream 7833 true Scaffold4273: 45266-53098 Capsella grandiflora
Cagra.4273s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold4273: 48099-53098 Capsella grandiflora
Cagra.4273s0011 5.0kb downstream 5.0kb downstream 7833 true Scaffold4273: 40266-48098 Capsella grandiflora
Cagra.4273s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold4273: 40266-45265 Capsella grandiflora
Cagra.4273s0011 10.0kb upstream 10.0kb upstream 12833 true Scaffold4273: 45266-58098 Capsella grandiflora
Cagra.4273s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold4273: 48099-58098 Capsella grandiflora
Cagra.4273s0011 10.0kb downstream 10.0kb downstream 12833 true Scaffold4273: 35266-48098 Capsella grandiflora
Cagra.4273s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold4273: 35266-45265 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378023 5261 Brassicaceae View MSA
123836601 5264 Brassicales-Malvales View MSA
124347081 5266 SBM View MSA
124245297 5268 Malvidae View MSA
124069406 5270 Rosid View MSA
123741910 5271 Pentapetalae View MSA
122794627 5272 Eudicot View MSA
122048281 5273 Angiosperm View MSA
121348170 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain