Gene : Cagra.4586s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10585//PTHR10585:SF36 - ER LUMEN PROTEIN RETAINING RECEPTOR Genomic Order:  2
Name:  ? Cagra.4586s0002 Secondary Identifier:  ? PAC:28911471
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4586s0002 0.5kb upstream 0.5kb upstream 2282 true Scaffold4586: 9365-11646 Capsella grandiflora
Cagra.4586s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4586: 9365-9864 Capsella grandiflora
Cagra.4586s0002 0.5kb downstream 0.5kb downstream 2282 true Scaffold4586: 9865-12146 Capsella grandiflora
Cagra.4586s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4586: 11647-12146 Capsella grandiflora
Cagra.4586s0002 1.0kb upstream 1.0kb upstream 2782 true Scaffold4586: 8865-11646 Capsella grandiflora
Cagra.4586s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4586: 8865-9864 Capsella grandiflora
Cagra.4586s0002 1.0kb downstream 1.0kb downstream 2782 true Scaffold4586: 9865-12646 Capsella grandiflora
Cagra.4586s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4586: 11647-12646 Capsella grandiflora
Cagra.4586s0002 2.0kb upstream 2.0kb upstream 3782 true Scaffold4586: 7865-11646 Capsella grandiflora
Cagra.4586s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4586: 7865-9864 Capsella grandiflora
Cagra.4586s0002 2.0kb downstream 2.0kb downstream 3782 true Scaffold4586: 9865-13646 Capsella grandiflora
Cagra.4586s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4586: 11647-13646 Capsella grandiflora
Cagra.4586s0002 5.0kb upstream 5.0kb upstream 6782 true Scaffold4586: 4865-11646 Capsella grandiflora
Cagra.4586s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4586: 4865-9864 Capsella grandiflora
Cagra.4586s0002 5.0kb downstream 5.0kb downstream 6782 true Scaffold4586: 9865-16646 Capsella grandiflora
Cagra.4586s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4586: 11647-16646 Capsella grandiflora
Cagra.4586s0002 10.0kb upstream 10.0kb upstream 11646 true Scaffold4586: 1-11646 Capsella grandiflora
Cagra.4586s0002 10.0kb upstream 10.0kb upstream 9864 false Scaffold4586: 1-9864 Capsella grandiflora
Cagra.4586s0002 10.0kb downstream 10.0kb downstream 11782 true Scaffold4586: 9865-21646 Capsella grandiflora
Cagra.4586s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4586: 11647-21646 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362926 5261 Brassicaceae View MSA
123839887 5264 Brassicales-Malvales View MSA
124344782 5266 SBM View MSA
124241671 5268 Malvidae View MSA
124064321 5270 Rosid View MSA
123752811 5271 Pentapetalae View MSA
122786359 5272 Eudicot View MSA
122047549 5273 Angiosperm View MSA
121310757 5274 Embryophyte View MSA
123348166 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain