Gene : Cagra.4586s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Genomic Order:  9
Name:  ? Cagra.4586s0009 Secondary Identifier:  ? PAC:28911479
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4586s0009 0.5kb upstream 0.5kb upstream 2886 true Scaffold4586: 32058-34943 Capsella grandiflora
Cagra.4586s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold4586: 34444-34943 Capsella grandiflora
Cagra.4586s0009 0.5kb downstream 0.5kb downstream 2886 true Scaffold4586: 31558-34443 Capsella grandiflora
Cagra.4586s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold4586: 31558-32057 Capsella grandiflora
Cagra.4586s0009 1.0kb upstream 1.0kb upstream 3386 true Scaffold4586: 32058-35443 Capsella grandiflora
Cagra.4586s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold4586: 34444-35443 Capsella grandiflora
Cagra.4586s0009 1.0kb downstream 1.0kb downstream 3386 true Scaffold4586: 31058-34443 Capsella grandiflora
Cagra.4586s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold4586: 31058-32057 Capsella grandiflora
Cagra.4586s0009 2.0kb upstream 2.0kb upstream 4386 true Scaffold4586: 32058-36443 Capsella grandiflora
Cagra.4586s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold4586: 34444-36443 Capsella grandiflora
Cagra.4586s0009 2.0kb downstream 2.0kb downstream 4386 true Scaffold4586: 30058-34443 Capsella grandiflora
Cagra.4586s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold4586: 30058-32057 Capsella grandiflora
Cagra.4586s0009 5.0kb upstream 5.0kb upstream 6409 true Scaffold4586: 32058-38466 Capsella grandiflora
Cagra.4586s0009 5.0kb upstream 5.0kb upstream 4023 false Scaffold4586: 34444-38466 Capsella grandiflora
Cagra.4586s0009 5.0kb downstream 5.0kb downstream 7386 true Scaffold4586: 27058-34443 Capsella grandiflora
Cagra.4586s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold4586: 27058-32057 Capsella grandiflora
Cagra.4586s0009 10.0kb upstream 10.0kb upstream 6409 true Scaffold4586: 32058-38466 Capsella grandiflora
Cagra.4586s0009 10.0kb upstream 10.0kb upstream 4023 false Scaffold4586: 34444-38466 Capsella grandiflora
Cagra.4586s0009 10.0kb downstream 10.0kb downstream 12386 true Scaffold4586: 22058-34443 Capsella grandiflora
Cagra.4586s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold4586: 22058-32057 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373073 5261 Brassicaceae View MSA
123840811 5264 Brassicales-Malvales View MSA
124344601 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain