Gene : Cagra.4190s0010 C. grandiflora v1.1
Defline:  (1 of 1) PF16040//PF16041 - Domain of unknown function (DUF4792) (DUF4792) // Domain of unknown function (DUF4793) (DUF4793) Genomic Order:  10
Name:  ? Cagra.4190s0010 Secondary Identifier:  ? PAC:28906391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4190s0010 0.5kb upstream 0.5kb upstream 2648 true Scaffold4190: 34303-36950 Capsella grandiflora
Cagra.4190s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold4190: 34303-34802 Capsella grandiflora
Cagra.4190s0010 0.5kb downstream 0.5kb downstream 2648 true Scaffold4190: 34803-37450 Capsella grandiflora
Cagra.4190s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold4190: 36951-37450 Capsella grandiflora
Cagra.4190s0010 1.0kb upstream 1.0kb upstream 3148 true Scaffold4190: 33803-36950 Capsella grandiflora
Cagra.4190s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold4190: 33803-34802 Capsella grandiflora
Cagra.4190s0010 1.0kb downstream 1.0kb downstream 3148 true Scaffold4190: 34803-37950 Capsella grandiflora
Cagra.4190s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold4190: 36951-37950 Capsella grandiflora
Cagra.4190s0010 2.0kb upstream 2.0kb upstream 4148 true Scaffold4190: 32803-36950 Capsella grandiflora
Cagra.4190s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold4190: 32803-34802 Capsella grandiflora
Cagra.4190s0010 2.0kb downstream 2.0kb downstream 4148 true Scaffold4190: 34803-38950 Capsella grandiflora
Cagra.4190s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold4190: 36951-38950 Capsella grandiflora
Cagra.4190s0010 5.0kb upstream 5.0kb upstream 7148 true Scaffold4190: 29803-36950 Capsella grandiflora
Cagra.4190s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold4190: 29803-34802 Capsella grandiflora
Cagra.4190s0010 5.0kb downstream 5.0kb downstream 7148 true Scaffold4190: 34803-41950 Capsella grandiflora
Cagra.4190s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold4190: 36951-41950 Capsella grandiflora
Cagra.4190s0010 10.0kb upstream 10.0kb upstream 12148 true Scaffold4190: 24803-36950 Capsella grandiflora
Cagra.4190s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold4190: 24803-34802 Capsella grandiflora
Cagra.4190s0010 10.0kb downstream 10.0kb downstream 12148 true Scaffold4190: 34803-46950 Capsella grandiflora
Cagra.4190s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold4190: 36951-46950 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333732 5261 Brassicaceae Singleton cluster - no MSA
123774646 5264 Brassicales-Malvales Singleton cluster - no MSA
124273078 5266 SBM Singleton cluster - no MSA
124128781 5268 Malvidae Singleton cluster - no MSA
124041184 5270 Rosid View MSA
123612167 5271 Pentapetalae View MSA
122646686 5272 Eudicot View MSA
122042274 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain