Gene : Cagra.4190s0015 C. grandiflora v1.1
Defline:  (1 of 1) 3.5.4.6 - AMP deaminase / Myoadenylate deaminase Genomic Order:  15
Name:  ? Cagra.4190s0015 Secondary Identifier:  ? PAC:28906398
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6596 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4190s0015 0.5kb upstream 0.5kb upstream 6185 true Scaffold4190: 51987-58171 Capsella grandiflora
Cagra.4190s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold4190: 57672-58171 Capsella grandiflora
Cagra.4190s0015 0.5kb downstream 0.5kb downstream 6185 true Scaffold4190: 51487-57671 Capsella grandiflora
Cagra.4190s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold4190: 51487-51986 Capsella grandiflora
Cagra.4190s0015 1.0kb upstream 1.0kb upstream 6685 true Scaffold4190: 51987-58671 Capsella grandiflora
Cagra.4190s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold4190: 57672-58671 Capsella grandiflora
Cagra.4190s0015 1.0kb downstream 1.0kb downstream 6685 true Scaffold4190: 50987-57671 Capsella grandiflora
Cagra.4190s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold4190: 50987-51986 Capsella grandiflora
Cagra.4190s0015 2.0kb upstream 2.0kb upstream 7685 true Scaffold4190: 51987-59671 Capsella grandiflora
Cagra.4190s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold4190: 57672-59671 Capsella grandiflora
Cagra.4190s0015 2.0kb downstream 2.0kb downstream 7685 true Scaffold4190: 49987-57671 Capsella grandiflora
Cagra.4190s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold4190: 49987-51986 Capsella grandiflora
Cagra.4190s0015 5.0kb upstream 5.0kb upstream 10685 true Scaffold4190: 51987-62671 Capsella grandiflora
Cagra.4190s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold4190: 57672-62671 Capsella grandiflora
Cagra.4190s0015 5.0kb downstream 5.0kb downstream 10685 true Scaffold4190: 46987-57671 Capsella grandiflora
Cagra.4190s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold4190: 46987-51986 Capsella grandiflora
Cagra.4190s0015 10.0kb upstream 10.0kb upstream 15685 true Scaffold4190: 51987-67671 Capsella grandiflora
Cagra.4190s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold4190: 57672-67671 Capsella grandiflora
Cagra.4190s0015 10.0kb downstream 10.0kb downstream 15685 true Scaffold4190: 41987-57671 Capsella grandiflora
Cagra.4190s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold4190: 41987-51986 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365523 5261 Brassicaceae View MSA
123840306 5264 Brassicales-Malvales View MSA
124337133 5266 SBM View MSA
124243054 5268 Malvidae View MSA
124067262 5270 Rosid View MSA
123738882 5271 Pentapetalae View MSA
122789679 5272 Eudicot View MSA
122046133 5273 Angiosperm View MSA
121347904 5274 Embryophyte View MSA
123428411 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain