Gene : Cagra.4190s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10032:SF215 - TRIHELIX TRANSCRIPTION FACTOR GT-3A-RELATED Genomic Order:  13
Name:  ? Cagra.4190s0013 Secondary Identifier:  ? PAC:28906390
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4190s0013 0.5kb upstream 0.5kb upstream 1992 true Scaffold4190: 45881-47872 Capsella grandiflora
Cagra.4190s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold4190: 45881-46380 Capsella grandiflora
Cagra.4190s0013 0.5kb downstream 0.5kb downstream 1992 true Scaffold4190: 46381-48372 Capsella grandiflora
Cagra.4190s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold4190: 47873-48372 Capsella grandiflora
Cagra.4190s0013 1.0kb upstream 1.0kb upstream 2492 true Scaffold4190: 45381-47872 Capsella grandiflora
Cagra.4190s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold4190: 45381-46380 Capsella grandiflora
Cagra.4190s0013 1.0kb downstream 1.0kb downstream 2492 true Scaffold4190: 46381-48872 Capsella grandiflora
Cagra.4190s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold4190: 47873-48872 Capsella grandiflora
Cagra.4190s0013 2.0kb upstream 2.0kb upstream 3492 true Scaffold4190: 44381-47872 Capsella grandiflora
Cagra.4190s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold4190: 44381-46380 Capsella grandiflora
Cagra.4190s0013 2.0kb downstream 2.0kb downstream 3492 true Scaffold4190: 46381-49872 Capsella grandiflora
Cagra.4190s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold4190: 47873-49872 Capsella grandiflora
Cagra.4190s0013 5.0kb upstream 5.0kb upstream 6492 true Scaffold4190: 41381-47872 Capsella grandiflora
Cagra.4190s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold4190: 41381-46380 Capsella grandiflora
Cagra.4190s0013 5.0kb downstream 5.0kb downstream 6492 true Scaffold4190: 46381-52872 Capsella grandiflora
Cagra.4190s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold4190: 47873-52872 Capsella grandiflora
Cagra.4190s0013 10.0kb upstream 10.0kb upstream 11492 true Scaffold4190: 36381-47872 Capsella grandiflora
Cagra.4190s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold4190: 36381-46380 Capsella grandiflora
Cagra.4190s0013 10.0kb downstream 10.0kb downstream 11492 true Scaffold4190: 46381-57872 Capsella grandiflora
Cagra.4190s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold4190: 47873-57872 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365992 5261 Brassicaceae View MSA
123838555 5264 Brassicales-Malvales View MSA
124337533 5266 SBM View MSA
124254329 5268 Malvidae View MSA
124061042 5270 Rosid View MSA
123753444 5271 Pentapetalae View MSA
122785862 5272 Eudicot View MSA
122041695 5273 Angiosperm View MSA
121348900 5274 Embryophyte View MSA
123381067 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain