Gene : Cagra.4195s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11960:SF12 - EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4E Genomic Order:  5
Name:  ? Cagra.4195s0005 Secondary Identifier:  ? PAC:28914492
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4195s0005 0.5kb upstream 0.5kb upstream 2167 true Scaffold4195: 9772-11938 Capsella grandiflora
Cagra.4195s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4195: 9772-10271 Capsella grandiflora
Cagra.4195s0005 0.5kb downstream 0.5kb downstream 2167 true Scaffold4195: 10272-12438 Capsella grandiflora
Cagra.4195s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4195: 11939-12438 Capsella grandiflora
Cagra.4195s0005 1.0kb upstream 1.0kb upstream 2667 true Scaffold4195: 9272-11938 Capsella grandiflora
Cagra.4195s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4195: 9272-10271 Capsella grandiflora
Cagra.4195s0005 1.0kb downstream 1.0kb downstream 2667 true Scaffold4195: 10272-12938 Capsella grandiflora
Cagra.4195s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4195: 11939-12938 Capsella grandiflora
Cagra.4195s0005 2.0kb upstream 2.0kb upstream 3667 true Scaffold4195: 8272-11938 Capsella grandiflora
Cagra.4195s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4195: 8272-10271 Capsella grandiflora
Cagra.4195s0005 2.0kb downstream 2.0kb downstream 3667 true Scaffold4195: 10272-13938 Capsella grandiflora
Cagra.4195s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4195: 11939-13938 Capsella grandiflora
Cagra.4195s0005 5.0kb upstream 5.0kb upstream 6667 true Scaffold4195: 5272-11938 Capsella grandiflora
Cagra.4195s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4195: 5272-10271 Capsella grandiflora
Cagra.4195s0005 5.0kb downstream 5.0kb downstream 6667 true Scaffold4195: 10272-16938 Capsella grandiflora
Cagra.4195s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4195: 11939-16938 Capsella grandiflora
Cagra.4195s0005 10.0kb upstream 10.0kb upstream 11667 true Scaffold4195: 272-11938 Capsella grandiflora
Cagra.4195s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4195: 272-10271 Capsella grandiflora
Cagra.4195s0005 10.0kb downstream 10.0kb downstream 11667 true Scaffold4195: 10272-21938 Capsella grandiflora
Cagra.4195s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4195: 11939-21938 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366493 5261 Brassicaceae View MSA
123830108 5264 Brassicales-Malvales View MSA
124345798 5266 SBM View MSA
124236913 5268 Malvidae View MSA
124067941 5270 Rosid View MSA
123737003 5271 Pentapetalae View MSA
122788011 5272 Eudicot View MSA
122048910 5273 Angiosperm View MSA
121311166 5274 Embryophyte View MSA
123428039 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain