Gene : Cagra.4205s0010 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Genomic Order:  10
Name:  ? Cagra.4205s0010 Secondary Identifier:  ? PAC:28919403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4205s0010 0.5kb upstream 0.5kb upstream 8427 true Scaffold4205: 38643-47069 Capsella grandiflora
Cagra.4205s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold4205: 38643-39142 Capsella grandiflora
Cagra.4205s0010 0.5kb downstream 0.5kb downstream 8427 true Scaffold4205: 39143-47569 Capsella grandiflora
Cagra.4205s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold4205: 47070-47569 Capsella grandiflora
Cagra.4205s0010 1.0kb upstream 1.0kb upstream 8927 true Scaffold4205: 38143-47069 Capsella grandiflora
Cagra.4205s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold4205: 38143-39142 Capsella grandiflora
Cagra.4205s0010 1.0kb downstream 1.0kb downstream 8927 true Scaffold4205: 39143-48069 Capsella grandiflora
Cagra.4205s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold4205: 47070-48069 Capsella grandiflora
Cagra.4205s0010 2.0kb upstream 2.0kb upstream 9927 true Scaffold4205: 37143-47069 Capsella grandiflora
Cagra.4205s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold4205: 37143-39142 Capsella grandiflora
Cagra.4205s0010 2.0kb downstream 2.0kb downstream 9927 true Scaffold4205: 39143-49069 Capsella grandiflora
Cagra.4205s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold4205: 47070-49069 Capsella grandiflora
Cagra.4205s0010 5.0kb upstream 5.0kb upstream 12927 true Scaffold4205: 34143-47069 Capsella grandiflora
Cagra.4205s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold4205: 34143-39142 Capsella grandiflora
Cagra.4205s0010 5.0kb downstream 5.0kb downstream 12927 true Scaffold4205: 39143-52069 Capsella grandiflora
Cagra.4205s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold4205: 47070-52069 Capsella grandiflora
Cagra.4205s0010 10.0kb upstream 10.0kb upstream 17927 true Scaffold4205: 29143-47069 Capsella grandiflora
Cagra.4205s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold4205: 29143-39142 Capsella grandiflora
Cagra.4205s0010 10.0kb downstream 10.0kb downstream 17927 true Scaffold4205: 39143-57069 Capsella grandiflora
Cagra.4205s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold4205: 47070-57069 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370132 5261 Brassicaceae View MSA
123834695 5264 Brassicales-Malvales View MSA
124350202 5266 SBM View MSA
124238335 5268 Malvidae View MSA
124070265 5270 Rosid View MSA
123752786 5271 Pentapetalae View MSA
122794247 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain