Gene : Cagra.4222s0002 C. grandiflora v1.1
Defline:  (1 of 46) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2
Name:  ? Cagra.4222s0002 Secondary Identifier:  ? PAC:28902737
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4222s0002 0.5kb upstream 0.5kb upstream 1666 true Scaffold4222: 1366-3031 Capsella grandiflora
Cagra.4222s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4222: 1366-1865 Capsella grandiflora
Cagra.4222s0002 0.5kb downstream 0.5kb downstream 1666 true Scaffold4222: 1866-3531 Capsella grandiflora
Cagra.4222s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4222: 3032-3531 Capsella grandiflora
Cagra.4222s0002 1.0kb upstream 1.0kb upstream 2166 true Scaffold4222: 866-3031 Capsella grandiflora
Cagra.4222s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4222: 866-1865 Capsella grandiflora
Cagra.4222s0002 1.0kb downstream 1.0kb downstream 2166 true Scaffold4222: 1866-4031 Capsella grandiflora
Cagra.4222s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4222: 3032-4031 Capsella grandiflora
Cagra.4222s0002 2.0kb upstream 2.0kb upstream 3031 true Scaffold4222: 1-3031 Capsella grandiflora
Cagra.4222s0002 2.0kb upstream 2.0kb upstream 1865 false Scaffold4222: 1-1865 Capsella grandiflora
Cagra.4222s0002 2.0kb downstream 2.0kb downstream 3166 true Scaffold4222: 1866-5031 Capsella grandiflora
Cagra.4222s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4222: 3032-5031 Capsella grandiflora
Cagra.4222s0002 5.0kb upstream 5.0kb upstream 3031 true Scaffold4222: 1-3031 Capsella grandiflora
Cagra.4222s0002 5.0kb upstream 5.0kb upstream 1865 false Scaffold4222: 1-1865 Capsella grandiflora
Cagra.4222s0002 5.0kb downstream 5.0kb downstream 6166 true Scaffold4222: 1866-8031 Capsella grandiflora
Cagra.4222s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4222: 3032-8031 Capsella grandiflora
Cagra.4222s0002 10.0kb upstream 10.0kb upstream 3031 true Scaffold4222: 1-3031 Capsella grandiflora
Cagra.4222s0002 10.0kb upstream 10.0kb upstream 1865 false Scaffold4222: 1-1865 Capsella grandiflora
Cagra.4222s0002 10.0kb downstream 10.0kb downstream 11166 true Scaffold4222: 1866-13031 Capsella grandiflora
Cagra.4222s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4222: 3032-13031 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511689 5273 Angiosperm View MSA
122378210 5261 Brassicaceae View MSA
123801788 5264 Brassicales-Malvales View MSA
124299049 5266 SBM View MSA
124150559 5268 Malvidae View MSA
123876152 5270 Rosid View MSA
123459863 5271 Pentapetalae View MSA
122495246 5272 Eudicot View MSA
120784726 5274 Embryophyte View MSA
122826623 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain