Gene : Cagra.4222s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31614:SF3 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  12
Name:  ? Cagra.4222s0012 Secondary Identifier:  ? PAC:28902733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4222s0012 0.5kb upstream 0.5kb upstream 1375 true Scaffold4222: 33838-35212 Capsella grandiflora
Cagra.4222s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold4222: 34713-35212 Capsella grandiflora
Cagra.4222s0012 0.5kb downstream 0.5kb downstream 1375 true Scaffold4222: 33338-34712 Capsella grandiflora
Cagra.4222s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold4222: 33338-33837 Capsella grandiflora
Cagra.4222s0012 1.0kb upstream 1.0kb upstream 1875 true Scaffold4222: 33838-35712 Capsella grandiflora
Cagra.4222s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold4222: 34713-35712 Capsella grandiflora
Cagra.4222s0012 1.0kb downstream 1.0kb downstream 1875 true Scaffold4222: 32838-34712 Capsella grandiflora
Cagra.4222s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold4222: 32838-33837 Capsella grandiflora
Cagra.4222s0012 2.0kb upstream 2.0kb upstream 2875 true Scaffold4222: 33838-36712 Capsella grandiflora
Cagra.4222s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold4222: 34713-36712 Capsella grandiflora
Cagra.4222s0012 2.0kb downstream 2.0kb downstream 2875 true Scaffold4222: 31838-34712 Capsella grandiflora
Cagra.4222s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold4222: 31838-33837 Capsella grandiflora
Cagra.4222s0012 5.0kb upstream 5.0kb upstream 5875 true Scaffold4222: 33838-39712 Capsella grandiflora
Cagra.4222s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold4222: 34713-39712 Capsella grandiflora
Cagra.4222s0012 5.0kb downstream 5.0kb downstream 5875 true Scaffold4222: 28838-34712 Capsella grandiflora
Cagra.4222s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold4222: 28838-33837 Capsella grandiflora
Cagra.4222s0012 10.0kb upstream 10.0kb upstream 10875 true Scaffold4222: 33838-44712 Capsella grandiflora
Cagra.4222s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold4222: 34713-44712 Capsella grandiflora
Cagra.4222s0012 10.0kb downstream 10.0kb downstream 10875 true Scaffold4222: 23838-34712 Capsella grandiflora
Cagra.4222s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold4222: 23838-33837 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378803 5261 Brassicaceae View MSA
123801996 5264 Brassicales-Malvales View MSA
124299228 5266 SBM View MSA
124150698 5268 Malvidae View MSA
124060655 5270 Rosid View MSA
123753295 5271 Pentapetalae View MSA
122796596 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain