Gene : Cagra.4227s0001 C. grandiflora v1.1
Defline:  (1 of 46) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  1
Name:  ? Cagra.4227s0001 Secondary Identifier:  ? PAC:28911883
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4227s0001 0.5kb upstream 0.5kb upstream 2168 true Scaffold4227: 1-2168 Capsella grandiflora
Cagra.4227s0001 0.5kb upstream 0.5kb upstream 6 false Scaffold4227: 1-6 Capsella grandiflora
Cagra.4227s0001 0.5kb downstream 0.5kb downstream 2662 true Scaffold4227: 7-2668 Capsella grandiflora
Cagra.4227s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4227: 2169-2668 Capsella grandiflora
Cagra.4227s0001 1.0kb upstream 1.0kb upstream 2168 true Scaffold4227: 1-2168 Capsella grandiflora
Cagra.4227s0001 1.0kb upstream 1.0kb upstream 6 false Scaffold4227: 1-6 Capsella grandiflora
Cagra.4227s0001 1.0kb downstream 1.0kb downstream 3162 true Scaffold4227: 7-3168 Capsella grandiflora
Cagra.4227s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4227: 2169-3168 Capsella grandiflora
Cagra.4227s0001 2.0kb upstream 2.0kb upstream 2168 true Scaffold4227: 1-2168 Capsella grandiflora
Cagra.4227s0001 2.0kb upstream 2.0kb upstream 6 false Scaffold4227: 1-6 Capsella grandiflora
Cagra.4227s0001 2.0kb downstream 2.0kb downstream 4162 true Scaffold4227: 7-4168 Capsella grandiflora
Cagra.4227s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4227: 2169-4168 Capsella grandiflora
Cagra.4227s0001 5.0kb upstream 5.0kb upstream 2168 true Scaffold4227: 1-2168 Capsella grandiflora
Cagra.4227s0001 5.0kb upstream 5.0kb upstream 6 false Scaffold4227: 1-6 Capsella grandiflora
Cagra.4227s0001 5.0kb downstream 5.0kb downstream 7162 true Scaffold4227: 7-7168 Capsella grandiflora
Cagra.4227s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4227: 2169-7168 Capsella grandiflora
Cagra.4227s0001 10.0kb upstream 10.0kb upstream 2168 true Scaffold4227: 1-2168 Capsella grandiflora
Cagra.4227s0001 10.0kb upstream 10.0kb upstream 6 false Scaffold4227: 1-6 Capsella grandiflora
Cagra.4227s0001 10.0kb downstream 10.0kb downstream 10755 true Scaffold4227: 7-10761 Capsella grandiflora
Cagra.4227s0001 10.0kb downstream 10.0kb downstream 8593 false Scaffold4227: 2169-10761 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369948 5261 Brassicaceae View MSA
123838419 5264 Brassicales-Malvales View MSA
124344560 5266 SBM View MSA
124246401 5268 Malvidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain