Gene : Cagra.4222s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13169//PTHR13169:SF1 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN Genomic Order:  13
Name:  ? Cagra.4222s0013 Secondary Identifier:  ? PAC:28902727
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4222s0013 0.5kb upstream 0.5kb upstream 2437 true Scaffold4222: 35813-38249 Capsella grandiflora
Cagra.4222s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold4222: 37750-38249 Capsella grandiflora
Cagra.4222s0013 0.5kb downstream 0.5kb downstream 2437 true Scaffold4222: 35313-37749 Capsella grandiflora
Cagra.4222s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold4222: 35313-35812 Capsella grandiflora
Cagra.4222s0013 1.0kb upstream 1.0kb upstream 2937 true Scaffold4222: 35813-38749 Capsella grandiflora
Cagra.4222s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold4222: 37750-38749 Capsella grandiflora
Cagra.4222s0013 1.0kb downstream 1.0kb downstream 2937 true Scaffold4222: 34813-37749 Capsella grandiflora
Cagra.4222s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold4222: 34813-35812 Capsella grandiflora
Cagra.4222s0013 2.0kb upstream 2.0kb upstream 3937 true Scaffold4222: 35813-39749 Capsella grandiflora
Cagra.4222s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold4222: 37750-39749 Capsella grandiflora
Cagra.4222s0013 2.0kb downstream 2.0kb downstream 3937 true Scaffold4222: 33813-37749 Capsella grandiflora
Cagra.4222s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold4222: 33813-35812 Capsella grandiflora
Cagra.4222s0013 5.0kb upstream 5.0kb upstream 6937 true Scaffold4222: 35813-42749 Capsella grandiflora
Cagra.4222s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold4222: 37750-42749 Capsella grandiflora
Cagra.4222s0013 5.0kb downstream 5.0kb downstream 6937 true Scaffold4222: 30813-37749 Capsella grandiflora
Cagra.4222s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold4222: 30813-35812 Capsella grandiflora
Cagra.4222s0013 10.0kb upstream 10.0kb upstream 11937 true Scaffold4222: 35813-47749 Capsella grandiflora
Cagra.4222s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold4222: 37750-47749 Capsella grandiflora
Cagra.4222s0013 10.0kb downstream 10.0kb downstream 11937 true Scaffold4222: 25813-37749 Capsella grandiflora
Cagra.4222s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold4222: 25813-35812 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378779 5261 Brassicaceae View MSA
123836115 5264 Brassicales-Malvales View MSA
124341541 5266 SBM View MSA
124248772 5268 Malvidae View MSA
124067947 5270 Rosid View MSA
123739636 5271 Pentapetalae View MSA
122787599 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain