Gene : Cagra.5650s0003 C. grandiflora v1.1
Defline:  (1 of 4) PTHR32409:SF3 - MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED Genomic Order:  3
Name:  ? Cagra.5650s0003 Secondary Identifier:  ? PAC:28907152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5650s0003 0.5kb upstream 0.5kb upstream 2476 true Scaffold5650: 5575-8050 Capsella grandiflora
Cagra.5650s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5650: 7551-8050 Capsella grandiflora
Cagra.5650s0003 0.5kb downstream 0.5kb downstream 2476 true Scaffold5650: 5075-7550 Capsella grandiflora
Cagra.5650s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5650: 5075-5574 Capsella grandiflora
Cagra.5650s0003 1.0kb upstream 1.0kb upstream 2976 true Scaffold5650: 5575-8550 Capsella grandiflora
Cagra.5650s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5650: 7551-8550 Capsella grandiflora
Cagra.5650s0003 1.0kb downstream 1.0kb downstream 2976 true Scaffold5650: 4575-7550 Capsella grandiflora
Cagra.5650s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5650: 4575-5574 Capsella grandiflora
Cagra.5650s0003 2.0kb upstream 2.0kb upstream 3976 true Scaffold5650: 5575-9550 Capsella grandiflora
Cagra.5650s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5650: 7551-9550 Capsella grandiflora
Cagra.5650s0003 2.0kb downstream 2.0kb downstream 3976 true Scaffold5650: 3575-7550 Capsella grandiflora
Cagra.5650s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5650: 3575-5574 Capsella grandiflora
Cagra.5650s0003 5.0kb upstream 5.0kb upstream 6976 true Scaffold5650: 5575-12550 Capsella grandiflora
Cagra.5650s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5650: 7551-12550 Capsella grandiflora
Cagra.5650s0003 5.0kb downstream 5.0kb downstream 6976 true Scaffold5650: 575-7550 Capsella grandiflora
Cagra.5650s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5650: 575-5574 Capsella grandiflora
Cagra.5650s0003 10.0kb upstream 10.0kb upstream 11976 true Scaffold5650: 5575-17550 Capsella grandiflora
Cagra.5650s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5650: 7551-17550 Capsella grandiflora
Cagra.5650s0003 10.0kb downstream 10.0kb downstream 7550 true Scaffold5650: 1-7550 Capsella grandiflora
Cagra.5650s0003 10.0kb downstream 10.0kb downstream 5574 false Scaffold5650: 1-5574 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026369 5273 Angiosperm View MSA
122368739 5261 Brassicaceae View MSA
123838837 5264 Brassicales-Malvales View MSA
124346713 5266 SBM View MSA
124243772 5268 Malvidae View MSA
124065101 5270 Rosid View MSA
123751692 5271 Pentapetalae View MSA
122795762 5272 Eudicot View MSA
121344161 5274 Embryophyte View MSA
123425894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain