Gene : Cagra.5650s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10857//PTHR10857:SF43 - COPINE Genomic Order:  4
Name:  ? Cagra.5650s0004 Secondary Identifier:  ? PAC:28907151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5650s0004 0.5kb upstream 0.5kb upstream 2683 true Scaffold5650: 8884-11566 Capsella grandiflora
Cagra.5650s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5650: 8884-9383 Capsella grandiflora
Cagra.5650s0004 0.5kb downstream 0.5kb downstream 2683 true Scaffold5650: 9384-12066 Capsella grandiflora
Cagra.5650s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5650: 11567-12066 Capsella grandiflora
Cagra.5650s0004 1.0kb upstream 1.0kb upstream 3183 true Scaffold5650: 8384-11566 Capsella grandiflora
Cagra.5650s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5650: 8384-9383 Capsella grandiflora
Cagra.5650s0004 1.0kb downstream 1.0kb downstream 3183 true Scaffold5650: 9384-12566 Capsella grandiflora
Cagra.5650s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5650: 11567-12566 Capsella grandiflora
Cagra.5650s0004 2.0kb upstream 2.0kb upstream 4183 true Scaffold5650: 7384-11566 Capsella grandiflora
Cagra.5650s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5650: 7384-9383 Capsella grandiflora
Cagra.5650s0004 2.0kb downstream 2.0kb downstream 4183 true Scaffold5650: 9384-13566 Capsella grandiflora
Cagra.5650s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5650: 11567-13566 Capsella grandiflora
Cagra.5650s0004 5.0kb upstream 5.0kb upstream 7183 true Scaffold5650: 4384-11566 Capsella grandiflora
Cagra.5650s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5650: 4384-9383 Capsella grandiflora
Cagra.5650s0004 5.0kb downstream 5.0kb downstream 7183 true Scaffold5650: 9384-16566 Capsella grandiflora
Cagra.5650s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5650: 11567-16566 Capsella grandiflora
Cagra.5650s0004 10.0kb upstream 10.0kb upstream 11566 true Scaffold5650: 1-11566 Capsella grandiflora
Cagra.5650s0004 10.0kb upstream 10.0kb upstream 9383 false Scaffold5650: 1-9383 Capsella grandiflora
Cagra.5650s0004 10.0kb downstream 10.0kb downstream 12183 true Scaffold5650: 9384-21566 Capsella grandiflora
Cagra.5650s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5650: 11567-21566 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375417 5261 Brassicaceae View MSA
123830882 5264 Brassicales-Malvales View MSA
124336404 5266 SBM View MSA
124241474 5268 Malvidae View MSA
124062843 5270 Rosid View MSA
123750755 5271 Pentapetalae View MSA
122796494 5272 Eudicot View MSA
122041662 5273 Angiosperm View MSA
121346693 5274 Embryophyte View MSA
123380427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain