Gene : Cagra.6133s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21433//PTHR21433:SF4 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA Genomic Order:  36
Name:  ? Cagra.6133s0036 Secondary Identifier:  ? PAC:28918576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6133s0036 0.5kb upstream 0.5kb upstream 3725 true Scaffold6133: 124373-128097 Capsella grandiflora
Cagra.6133s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold6133: 127598-128097 Capsella grandiflora
Cagra.6133s0036 0.5kb downstream 0.5kb downstream 3725 true Scaffold6133: 123873-127597 Capsella grandiflora
Cagra.6133s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold6133: 123873-124372 Capsella grandiflora
Cagra.6133s0036 1.0kb upstream 1.0kb upstream 4225 true Scaffold6133: 124373-128597 Capsella grandiflora
Cagra.6133s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold6133: 127598-128597 Capsella grandiflora
Cagra.6133s0036 1.0kb downstream 1.0kb downstream 4225 true Scaffold6133: 123373-127597 Capsella grandiflora
Cagra.6133s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold6133: 123373-124372 Capsella grandiflora
Cagra.6133s0036 2.0kb upstream 2.0kb upstream 5225 true Scaffold6133: 124373-129597 Capsella grandiflora
Cagra.6133s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold6133: 127598-129597 Capsella grandiflora
Cagra.6133s0036 2.0kb downstream 2.0kb downstream 5225 true Scaffold6133: 122373-127597 Capsella grandiflora
Cagra.6133s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold6133: 122373-124372 Capsella grandiflora
Cagra.6133s0036 5.0kb upstream 5.0kb upstream 8225 true Scaffold6133: 124373-132597 Capsella grandiflora
Cagra.6133s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold6133: 127598-132597 Capsella grandiflora
Cagra.6133s0036 5.0kb downstream 5.0kb downstream 8225 true Scaffold6133: 119373-127597 Capsella grandiflora
Cagra.6133s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold6133: 119373-124372 Capsella grandiflora
Cagra.6133s0036 10.0kb upstream 10.0kb upstream 12009 true Scaffold6133: 124373-136381 Capsella grandiflora
Cagra.6133s0036 10.0kb upstream 10.0kb upstream 8784 false Scaffold6133: 127598-136381 Capsella grandiflora
Cagra.6133s0036 10.0kb downstream 10.0kb downstream 13225 true Scaffold6133: 114373-127597 Capsella grandiflora
Cagra.6133s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold6133: 114373-124372 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361948 5261 Brassicaceae View MSA
123837614 5264 Brassicales-Malvales View MSA
124337122 5266 SBM View MSA
124251175 5268 Malvidae View MSA
124065114 5270 Rosid View MSA
123747288 5271 Pentapetalae View MSA
122787986 5272 Eudicot View MSA
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain