Gene : Cagra.5249s0026 C. grandiflora v1.1
Defline:  (1 of 19) PTHR31589:SF17 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  26
Name:  ? Cagra.5249s0026 Secondary Identifier:  ? PAC:28918119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5249s0026 0.5kb upstream 0.5kb upstream 2382 true Scaffold5249: 95281-97662 Capsella grandiflora
Cagra.5249s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold5249: 95281-95780 Capsella grandiflora
Cagra.5249s0026 0.5kb downstream 0.5kb downstream 2382 true Scaffold5249: 95781-98162 Capsella grandiflora
Cagra.5249s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold5249: 97663-98162 Capsella grandiflora
Cagra.5249s0026 1.0kb upstream 1.0kb upstream 2882 true Scaffold5249: 94781-97662 Capsella grandiflora
Cagra.5249s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold5249: 94781-95780 Capsella grandiflora
Cagra.5249s0026 1.0kb downstream 1.0kb downstream 2882 true Scaffold5249: 95781-98662 Capsella grandiflora
Cagra.5249s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold5249: 97663-98662 Capsella grandiflora
Cagra.5249s0026 2.0kb upstream 2.0kb upstream 3882 true Scaffold5249: 93781-97662 Capsella grandiflora
Cagra.5249s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold5249: 93781-95780 Capsella grandiflora
Cagra.5249s0026 2.0kb downstream 2.0kb downstream 3882 true Scaffold5249: 95781-99662 Capsella grandiflora
Cagra.5249s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold5249: 97663-99662 Capsella grandiflora
Cagra.5249s0026 5.0kb upstream 5.0kb upstream 6882 true Scaffold5249: 90781-97662 Capsella grandiflora
Cagra.5249s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold5249: 90781-95780 Capsella grandiflora
Cagra.5249s0026 5.0kb downstream 5.0kb downstream 6882 true Scaffold5249: 95781-102662 Capsella grandiflora
Cagra.5249s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold5249: 97663-102662 Capsella grandiflora
Cagra.5249s0026 10.0kb upstream 10.0kb upstream 11882 true Scaffold5249: 85781-97662 Capsella grandiflora
Cagra.5249s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold5249: 85781-95780 Capsella grandiflora
Cagra.5249s0026 10.0kb downstream 10.0kb downstream 11882 true Scaffold5249: 95781-107662 Capsella grandiflora
Cagra.5249s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold5249: 97663-107662 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380303 5261 Brassicaceae View MSA
123802645 5264 Brassicales-Malvales View MSA
124299826 5266 SBM View MSA
124151141 5268 Malvidae View MSA
123876641 5270 Rosid View MSA
123754853 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain