Gene : Cagra.5249s0029 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11527:SF140 - PROTEIN RESTRICTED TEV MOVEMENT 2 Genomic Order:  29
Name:  ? Cagra.5249s0029 Secondary Identifier:  ? PAC:28918111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5249s0029 0.5kb upstream 0.5kb upstream 1878 true Scaffold5249: 107071-108948 Capsella grandiflora
Cagra.5249s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold5249: 107071-107570 Capsella grandiflora
Cagra.5249s0029 0.5kb downstream 0.5kb downstream 1878 true Scaffold5249: 107571-109448 Capsella grandiflora
Cagra.5249s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold5249: 108949-109448 Capsella grandiflora
Cagra.5249s0029 1.0kb upstream 1.0kb upstream 2378 true Scaffold5249: 106571-108948 Capsella grandiflora
Cagra.5249s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold5249: 106571-107570 Capsella grandiflora
Cagra.5249s0029 1.0kb downstream 1.0kb downstream 2378 true Scaffold5249: 107571-109948 Capsella grandiflora
Cagra.5249s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold5249: 108949-109948 Capsella grandiflora
Cagra.5249s0029 2.0kb upstream 2.0kb upstream 3378 true Scaffold5249: 105571-108948 Capsella grandiflora
Cagra.5249s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold5249: 105571-107570 Capsella grandiflora
Cagra.5249s0029 2.0kb downstream 2.0kb downstream 3378 true Scaffold5249: 107571-110948 Capsella grandiflora
Cagra.5249s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold5249: 108949-110948 Capsella grandiflora
Cagra.5249s0029 5.0kb upstream 5.0kb upstream 6378 true Scaffold5249: 102571-108948 Capsella grandiflora
Cagra.5249s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold5249: 102571-107570 Capsella grandiflora
Cagra.5249s0029 5.0kb downstream 5.0kb downstream 6378 true Scaffold5249: 107571-113948 Capsella grandiflora
Cagra.5249s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold5249: 108949-113948 Capsella grandiflora
Cagra.5249s0029 10.0kb upstream 10.0kb upstream 11378 true Scaffold5249: 97571-108948 Capsella grandiflora
Cagra.5249s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold5249: 97571-107570 Capsella grandiflora
Cagra.5249s0029 10.0kb downstream 10.0kb downstream 10516 true Scaffold5249: 107571-118086 Capsella grandiflora
Cagra.5249s0029 10.0kb downstream 10.0kb downstream 9138 false Scaffold5249: 108949-118086 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368483 5261 Brassicaceae View MSA
123840868 5264 Brassicales-Malvales View MSA
124344040 5266 SBM View MSA
124238801 5268 Malvidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain