Gene : Cagra.5323s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23153:SF37 - DNA DAMAGE RESPONSE PROTEIN WSS1 Genomic Order:  1
Name:  ? Cagra.5323s0001 Secondary Identifier:  ? PAC:28917297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5323s0001 0.5kb upstream 0.5kb upstream 3761 true Scaffold5323: 1159-4919 Capsella grandiflora
Cagra.5323s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5323: 4420-4919 Capsella grandiflora
Cagra.5323s0001 0.5kb downstream 0.5kb downstream 3761 true Scaffold5323: 659-4419 Capsella grandiflora
Cagra.5323s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5323: 659-1158 Capsella grandiflora
Cagra.5323s0001 1.0kb upstream 1.0kb upstream 4261 true Scaffold5323: 1159-5419 Capsella grandiflora
Cagra.5323s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5323: 4420-5419 Capsella grandiflora
Cagra.5323s0001 1.0kb downstream 1.0kb downstream 4261 true Scaffold5323: 159-4419 Capsella grandiflora
Cagra.5323s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5323: 159-1158 Capsella grandiflora
Cagra.5323s0001 2.0kb upstream 2.0kb upstream 5261 true Scaffold5323: 1159-6419 Capsella grandiflora
Cagra.5323s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5323: 4420-6419 Capsella grandiflora
Cagra.5323s0001 2.0kb downstream 2.0kb downstream 4419 true Scaffold5323: 1-4419 Capsella grandiflora
Cagra.5323s0001 2.0kb downstream 2.0kb downstream 1158 false Scaffold5323: 1-1158 Capsella grandiflora
Cagra.5323s0001 5.0kb upstream 5.0kb upstream 8261 true Scaffold5323: 1159-9419 Capsella grandiflora
Cagra.5323s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5323: 4420-9419 Capsella grandiflora
Cagra.5323s0001 5.0kb downstream 5.0kb downstream 4419 true Scaffold5323: 1-4419 Capsella grandiflora
Cagra.5323s0001 5.0kb downstream 5.0kb downstream 1158 false Scaffold5323: 1-1158 Capsella grandiflora
Cagra.5323s0001 10.0kb upstream 10.0kb upstream 13261 true Scaffold5323: 1159-14419 Capsella grandiflora
Cagra.5323s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold5323: 4420-14419 Capsella grandiflora
Cagra.5323s0001 10.0kb downstream 10.0kb downstream 4419 true Scaffold5323: 1-4419 Capsella grandiflora
Cagra.5323s0001 10.0kb downstream 10.0kb downstream 1158 false Scaffold5323: 1-1158 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375453 5261 Brassicaceae View MSA
123830372 5264 Brassicales-Malvales View MSA
124340317 5266 SBM View MSA
124252101 5268 Malvidae View MSA
124067155 5270 Rosid View MSA
123740113 5271 Pentapetalae View MSA
122785802 5272 Eudicot View MSA
122043963 5273 Angiosperm View MSA
121347536 5274 Embryophyte View MSA
123425458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain