Gene : Cagra.5647s0023 C. grandiflora v1.1
Defline:  (1 of 4) 6.1.1.14 - Glycine--tRNA ligase / Glycyl-tRNA synthetase Genomic Order:  23
Name:  ? Cagra.5647s0023 Secondary Identifier:  ? PAC:28905042
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRNA-CHARGING-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5647s0023 0.5kb upstream 0.5kb upstream 4171 true Scaffold5647: 117398-121568 Capsella grandiflora
Cagra.5647s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold5647: 117398-117897 Capsella grandiflora
Cagra.5647s0023 0.5kb downstream 0.5kb downstream 4171 true Scaffold5647: 117898-122068 Capsella grandiflora
Cagra.5647s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold5647: 121569-122068 Capsella grandiflora
Cagra.5647s0023 1.0kb upstream 1.0kb upstream 4671 true Scaffold5647: 116898-121568 Capsella grandiflora
Cagra.5647s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold5647: 116898-117897 Capsella grandiflora
Cagra.5647s0023 1.0kb downstream 1.0kb downstream 4671 true Scaffold5647: 117898-122568 Capsella grandiflora
Cagra.5647s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold5647: 121569-122568 Capsella grandiflora
Cagra.5647s0023 2.0kb upstream 2.0kb upstream 5671 true Scaffold5647: 115898-121568 Capsella grandiflora
Cagra.5647s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold5647: 115898-117897 Capsella grandiflora
Cagra.5647s0023 2.0kb downstream 2.0kb downstream 5671 true Scaffold5647: 117898-123568 Capsella grandiflora
Cagra.5647s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold5647: 121569-123568 Capsella grandiflora
Cagra.5647s0023 5.0kb upstream 5.0kb upstream 8671 true Scaffold5647: 112898-121568 Capsella grandiflora
Cagra.5647s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold5647: 112898-117897 Capsella grandiflora
Cagra.5647s0023 5.0kb downstream 5.0kb downstream 8671 true Scaffold5647: 117898-126568 Capsella grandiflora
Cagra.5647s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold5647: 121569-126568 Capsella grandiflora
Cagra.5647s0023 10.0kb upstream 10.0kb upstream 13671 true Scaffold5647: 107898-121568 Capsella grandiflora
Cagra.5647s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold5647: 107898-117897 Capsella grandiflora
Cagra.5647s0023 10.0kb downstream 10.0kb downstream 13671 true Scaffold5647: 117898-131568 Capsella grandiflora
Cagra.5647s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold5647: 121569-131568 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370515 5261 Brassicaceae View MSA
123828502 5264 Brassicales-Malvales View MSA
124338437 5266 SBM View MSA
124239100 5268 Malvidae View MSA
124063587 5270 Rosid View MSA
123751424 5271 Pentapetalae View MSA
122793864 5272 Eudicot View MSA
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain