Gene : Cagra.5647s0028 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12599:SF2 - PCD/DCOH-LIKE PROTEIN 2 Genomic Order:  28
Name:  ? Cagra.5647s0028 Secondary Identifier:  ? PAC:28905013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5647s0028 0.5kb upstream 0.5kb upstream 2939 true Scaffold5647: 135637-138575 Capsella grandiflora
Cagra.5647s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold5647: 135637-136136 Capsella grandiflora
Cagra.5647s0028 0.5kb downstream 0.5kb downstream 2939 true Scaffold5647: 136137-139075 Capsella grandiflora
Cagra.5647s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold5647: 138576-139075 Capsella grandiflora
Cagra.5647s0028 1.0kb upstream 1.0kb upstream 3439 true Scaffold5647: 135137-138575 Capsella grandiflora
Cagra.5647s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold5647: 135137-136136 Capsella grandiflora
Cagra.5647s0028 1.0kb downstream 1.0kb downstream 3439 true Scaffold5647: 136137-139575 Capsella grandiflora
Cagra.5647s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold5647: 138576-139575 Capsella grandiflora
Cagra.5647s0028 2.0kb upstream 2.0kb upstream 4439 true Scaffold5647: 134137-138575 Capsella grandiflora
Cagra.5647s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold5647: 134137-136136 Capsella grandiflora
Cagra.5647s0028 2.0kb downstream 2.0kb downstream 4439 true Scaffold5647: 136137-140575 Capsella grandiflora
Cagra.5647s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold5647: 138576-140575 Capsella grandiflora
Cagra.5647s0028 5.0kb upstream 5.0kb upstream 7439 true Scaffold5647: 131137-138575 Capsella grandiflora
Cagra.5647s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold5647: 131137-136136 Capsella grandiflora
Cagra.5647s0028 5.0kb downstream 5.0kb downstream 7439 true Scaffold5647: 136137-143575 Capsella grandiflora
Cagra.5647s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold5647: 138576-143575 Capsella grandiflora
Cagra.5647s0028 10.0kb upstream 10.0kb upstream 12439 true Scaffold5647: 126137-138575 Capsella grandiflora
Cagra.5647s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold5647: 126137-136136 Capsella grandiflora
Cagra.5647s0028 10.0kb downstream 10.0kb downstream 12439 true Scaffold5647: 136137-148575 Capsella grandiflora
Cagra.5647s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold5647: 138576-148575 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360633 5261 Brassicaceae View MSA
123834657 5264 Brassicales-Malvales View MSA
124341865 5266 SBM View MSA
124240527 5268 Malvidae View MSA
124068632 5270 Rosid View MSA
123742816 5271 Pentapetalae View MSA
122797926 5272 Eudicot View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain