Gene : Cagra.5647s0029 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15629//PTHR15629:SF9 - SH3YL1 PROTEIN Genomic Order:  29
Name:  ? Cagra.5647s0029 Secondary Identifier:  ? PAC:28905063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5647s0029 0.5kb upstream 0.5kb upstream 3486 true Scaffold5647: 138202-141687 Capsella grandiflora
Cagra.5647s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold5647: 141188-141687 Capsella grandiflora
Cagra.5647s0029 0.5kb downstream 0.5kb downstream 3486 true Scaffold5647: 137702-141187 Capsella grandiflora
Cagra.5647s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold5647: 137702-138201 Capsella grandiflora
Cagra.5647s0029 1.0kb upstream 1.0kb upstream 3986 true Scaffold5647: 138202-142187 Capsella grandiflora
Cagra.5647s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold5647: 141188-142187 Capsella grandiflora
Cagra.5647s0029 1.0kb downstream 1.0kb downstream 3986 true Scaffold5647: 137202-141187 Capsella grandiflora
Cagra.5647s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold5647: 137202-138201 Capsella grandiflora
Cagra.5647s0029 2.0kb upstream 2.0kb upstream 4986 true Scaffold5647: 138202-143187 Capsella grandiflora
Cagra.5647s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold5647: 141188-143187 Capsella grandiflora
Cagra.5647s0029 2.0kb downstream 2.0kb downstream 4986 true Scaffold5647: 136202-141187 Capsella grandiflora
Cagra.5647s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold5647: 136202-138201 Capsella grandiflora
Cagra.5647s0029 5.0kb upstream 5.0kb upstream 7986 true Scaffold5647: 138202-146187 Capsella grandiflora
Cagra.5647s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold5647: 141188-146187 Capsella grandiflora
Cagra.5647s0029 5.0kb downstream 5.0kb downstream 7986 true Scaffold5647: 133202-141187 Capsella grandiflora
Cagra.5647s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold5647: 133202-138201 Capsella grandiflora
Cagra.5647s0029 10.0kb upstream 10.0kb upstream 12986 true Scaffold5647: 138202-151187 Capsella grandiflora
Cagra.5647s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold5647: 141188-151187 Capsella grandiflora
Cagra.5647s0029 10.0kb downstream 10.0kb downstream 12986 true Scaffold5647: 128202-141187 Capsella grandiflora
Cagra.5647s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold5647: 128202-138201 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373768 5261 Brassicaceae View MSA
123834155 5264 Brassicales-Malvales View MSA
124339977 5266 SBM View MSA
124237093 5268 Malvidae View MSA
124073476 5270 Rosid View MSA
123736905 5271 Pentapetalae View MSA
122785686 5272 Eudicot View MSA
122047876 5273 Angiosperm View MSA
121349418 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain