Gene : Cagra.5120s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11831:SF12 - RIBOSOMAL PROTEIN S4, MITOCHONDRIAL Genomic Order:  3
Name:  ? Cagra.5120s0003 Secondary Identifier:  ? PAC:28904229
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5120s0003 0.5kb upstream 0.5kb upstream 1583 true Scaffold5120: 4345-5927 Capsella grandiflora
Cagra.5120s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5120: 4345-4844 Capsella grandiflora
Cagra.5120s0003 0.5kb downstream 0.5kb downstream 1583 true Scaffold5120: 4845-6427 Capsella grandiflora
Cagra.5120s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5120: 5928-6427 Capsella grandiflora
Cagra.5120s0003 1.0kb upstream 1.0kb upstream 2083 true Scaffold5120: 3845-5927 Capsella grandiflora
Cagra.5120s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5120: 3845-4844 Capsella grandiflora
Cagra.5120s0003 1.0kb downstream 1.0kb downstream 2083 true Scaffold5120: 4845-6927 Capsella grandiflora
Cagra.5120s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5120: 5928-6927 Capsella grandiflora
Cagra.5120s0003 2.0kb upstream 2.0kb upstream 3083 true Scaffold5120: 2845-5927 Capsella grandiflora
Cagra.5120s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5120: 2845-4844 Capsella grandiflora
Cagra.5120s0003 2.0kb downstream 2.0kb downstream 3083 true Scaffold5120: 4845-7927 Capsella grandiflora
Cagra.5120s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5120: 5928-7927 Capsella grandiflora
Cagra.5120s0003 5.0kb upstream 5.0kb upstream 5927 true Scaffold5120: 1-5927 Capsella grandiflora
Cagra.5120s0003 5.0kb upstream 5.0kb upstream 4844 false Scaffold5120: 1-4844 Capsella grandiflora
Cagra.5120s0003 5.0kb downstream 5.0kb downstream 6083 true Scaffold5120: 4845-10927 Capsella grandiflora
Cagra.5120s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5120: 5928-10927 Capsella grandiflora
Cagra.5120s0003 10.0kb upstream 10.0kb upstream 5927 true Scaffold5120: 1-5927 Capsella grandiflora
Cagra.5120s0003 10.0kb upstream 10.0kb upstream 4844 false Scaffold5120: 1-4844 Capsella grandiflora
Cagra.5120s0003 10.0kb downstream 10.0kb downstream 11083 true Scaffold5120: 4845-15927 Capsella grandiflora
Cagra.5120s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold5120: 5928-15927 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026997 5273 Angiosperm View MSA
122333911 5261 Brassicaceae Singleton cluster - no MSA
123774806 5264 Brassicales-Malvales Singleton cluster - no MSA
124273228 5266 SBM Singleton cluster - no MSA
124254051 5268 Malvidae View MSA
124069507 5270 Rosid View MSA
123748461 5271 Pentapetalae View MSA
122772633 5272 Eudicot View MSA
121296723 5274 Embryophyte View MSA
123334843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain